Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF13O43567 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF13O43567 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF13O43567 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF13O43567 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF13O43567 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RNF13O43567 REXO1L8P-201ENST00000604378 1897 ntBASIC14.82□□□□□ -0.04
RNF13O43567 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RNF13O43567 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF13O43567 AP005117.1-202ENST00000581724 1908 ntBASIC14.82□□□□□ -0.04
RNF13O43567 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF13O43567 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF13O43567 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF13O43567 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF13O43567 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RNF13O43567 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RNF13O43567 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF13O43567 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF13O43567 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF13O43567 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF13O43567 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF13O43567 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF13O43567 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF13O43567 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RNF13O43567 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF13O43567 AL590627.1-203ENST00000421194 1026 ntBASIC14.81□□□□□ -0.04
RNF13O43567 AC007967.2-201ENST00000432613 625 ntBASIC14.81□□□□□ -0.04
RNF13O43567 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF13O43567 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.81□□□□□ -0.04
RNF13O43567 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.81□□□□□ -0.04
RNF13O43567 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RNF13O43567 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.81□□□□□ -0.04
RNF13O43567 AC145285.3-201ENST00000564603 959 ntBASIC14.81□□□□□ -0.04
RNF13O43567 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF13O43567 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RNF13O43567 IL9RP2-201ENST00000423948 1312 ntBASIC14.81□□□□□ -0.04
RNF13O43567 BCAR1-209ENST00000546196 1340 ntBASIC14.81□□□□□ -0.04
RNF13O43567 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RNF13O43567 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.81□□□□□ -0.04
RNF13O43567 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
RNF13O43567 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF13O43567 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF13O43567 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RNF13O43567 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
RNF13O43567 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.8□□□□□ -0.04
RNF13O43567 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF13O43567 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF13O43567 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF13O43567 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.8□□□□□ -0.04
RNF13O43567 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.8□□□□□ -0.04
RNF13O43567 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.8□□□□□ -0.04
RNF13O43567 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.8□□□□□ -0.04
RNF13O43567 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.8□□□□□ -0.04
RNF13O43567 AC034105.1-201ENST00000563488 319 ntBASIC14.8□□□□□ -0.04
RNF13O43567 AC018845.2-201ENST00000568326 409 ntBASIC14.8□□□□□ -0.04
RNF13O43567 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.8□□□□□ -0.04
RNF13O43567 AC004877.2-201ENST00000623941 599 ntBASIC14.8□□□□□ -0.04
RNF13O43567 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RNF13O43567 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF13O43567 ZNF259P1-201ENST00000407656 1365 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms