Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A1O14983 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A1O14983 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A1O14983 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.46■□□□□ 0.55
ATP2A1O14983 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A1O14983 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP2A1O14983 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A1O14983 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.46■□□□□ 0.55
ATP2A1O14983 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP2A1O14983 AL512384.1-201ENST00000406683 331 ntBASIC18.46■□□□□ 0.55
ATP2A1O14983 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A1O14983 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A1O14983 AC011495.1-201ENST00000498085 584 ntBASIC18.46■□□□□ 0.55
ATP2A1O14983 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.46■□□□□ 0.55
ATP2A1O14983 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A1O14983 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.46■□□□□ 0.55
ATP2A1O14983 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A1O14983 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP2A1O14983 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.46■□□□□ 0.55
ATP2A1O14983 AC093726.1-201ENST00000608064 963 ntBASIC18.46■□□□□ 0.55
ATP2A1O14983 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A1O14983 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A1O14983 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ATP2A1O14983 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ATP2A1O14983 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A1O14983 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A1O14983 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.46■□□□□ 0.55
ATP2A1O14983 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A1O14983 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ATP2A1O14983 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
ATP2A1O14983 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
ATP2A1O14983 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP2A1O14983 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.45■□□□□ 0.54
ATP2A1O14983 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP2A1O14983 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP2A1O14983 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP2A1O14983 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP2A1O14983 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ATP2A1O14983 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP2A1O14983 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.45■□□□□ 0.54
ATP2A1O14983 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP2A1O14983 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.45■□□□□ 0.54
ATP2A1O14983 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ATP2A1O14983 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP2A1O14983 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ATP2A1O14983 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.45■□□□□ 0.54
ATP2A1O14983 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.45■□□□□ 0.54
ATP2A1O14983 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ATP2A1O14983 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.45■□□□□ 0.54
ATP2A1O14983 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.45■□□□□ 0.54
ATP2A1O14983 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.45■□□□□ 0.54
ATP2A1O14983 AC243562.2-201ENST00000561247 970 ntBASIC18.45■□□□□ 0.54
ATP2A1O14983 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
ATP2A1O14983 AL359881.2-201ENST00000602973 570 ntBASIC18.45■□□□□ 0.54
ATP2A1O14983 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP2A1O14983 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ATP2A1O14983 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP2A1O14983 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.45■□□□□ 0.54
ATP2A1O14983 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.45■□□□□ 0.54
ATP2A1O14983 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP2A1O14983 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP2A1O14983 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ATP2A1O14983 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP2A1O14983 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.45■□□□□ 0.54
ATP2A1O14983 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
ATP2A1O14983 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP2A1O14983 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP2A1O14983 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ATP2A1O14983 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATP2A1O14983 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP2A1O14983 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATP2A1O14983 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ATP2A1O14983 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP2A1O14983 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.44■□□□□ 0.54
ATP2A1O14983 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP2A1O14983 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP2A1O14983 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP2A1O14983 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.44■□□□□ 0.54
ATP2A1O14983 MYCLP2-201ENST00000449268 967 ntBASIC18.44■□□□□ 0.54
ATP2A1O14983 ELK1P1-201ENST00000485699 580 ntBASIC18.44■□□□□ 0.54
ATP2A1O14983 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATP2A1O14983 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.44■□□□□ 0.54
ATP2A1O14983 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP2A1O14983 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP2A1O14983 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
ATP2A1O14983 AC123567.1-201ENST00000548294 1261 ntBASIC18.44■□□□□ 0.54
ATP2A1O14983 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
ATP2A1O14983 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.44■□□□□ 0.54
ATP2A1O14983 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATP2A1O14983 RARRES2P5-201ENST00000564013 466 ntBASIC18.44■□□□□ 0.54
ATP2A1O14983 AC106886.1-201ENST00000568660 600 ntBASIC18.44■□□□□ 0.54
ATP2A1O14983 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP2A1O14983 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP2A1O14983 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ATP2A1O14983 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP2A1O14983 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.44■□□□□ 0.54
ATP2A1O14983 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP2A1O14983 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP2A1O14983 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP2A1O14983 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms