Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NTN3O00634 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.16■□□□□ 0.02
NTN3O00634 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.16■□□□□ 0.02
NTN3O00634 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.16■□□□□ 0.02
NTN3O00634 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
NTN3O00634 RPL7P3-201ENST00000441388 714 ntBASIC15.16■□□□□ 0.02
NTN3O00634 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
NTN3O00634 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NTN3O00634 FO681548.1-201ENST00000455617 1132 ntBASIC15.16■□□□□ 0.02
NTN3O00634 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NTN3O00634 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NTN3O00634 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.16■□□□□ 0.02
NTN3O00634 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.16■□□□□ 0.02
NTN3O00634 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.16■□□□□ 0.02
NTN3O00634 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.16■□□□□ 0.02
NTN3O00634 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
NTN3O00634 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.16■□□□□ 0.02
NTN3O00634 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NTN3O00634 CLUHP6-201ENST00000580789 941 ntBASIC15.16■□□□□ 0.02
NTN3O00634 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NTN3O00634 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.16■□□□□ 0.02
NTN3O00634 AC000095.1-201ENST00000603208 874 ntBASIC15.16■□□□□ 0.02
NTN3O00634 AC097359.3-201ENST00000603982 1210 ntBASIC15.16■□□□□ 0.02
NTN3O00634 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.16■□□□□ 0.02
NTN3O00634 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NTN3O00634 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NTN3O00634 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NTN3O00634 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NTN3O00634 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NTN3O00634 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NTN3O00634 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NTN3O00634 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NTN3O00634 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
NTN3O00634 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NTN3O00634 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NTN3O00634 AC134407.2-201ENST00000625089 1978 ntBASIC15.16■□□□□ 0.02
NTN3O00634 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NTN3O00634 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.16■□□□□ 0.02
NTN3O00634 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NTN3O00634 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NTN3O00634 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NTN3O00634 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.15■□□□□ 0.02
NTN3O00634 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.15■□□□□ 0.02
NTN3O00634 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.15■□□□□ 0.02
NTN3O00634 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.15■□□□□ 0.02
NTN3O00634 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
NTN3O00634 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NTN3O00634 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NTN3O00634 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.15■□□□□ 0.02
NTN3O00634 AC092933.1-201ENST00000393644 945 ntBASIC15.15■□□□□ 0.02
NTN3O00634 MIR1908-201ENST00000410394 80 ntBASIC15.15■□□□□ 0.02
NTN3O00634 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.15■□□□□ 0.02
NTN3O00634 CSF2RBP1-201ENST00000447905 391 ntBASIC15.15■□□□□ 0.02
NTN3O00634 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.15■□□□□ 0.02
NTN3O00634 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NTN3O00634 VDAC1P7-201ENST00000462417 847 ntBASIC15.15■□□□□ 0.02
NTN3O00634 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.15■□□□□ 0.02
NTN3O00634 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 RNA5SP412-201ENST00000516234 123 ntBASIC15.15■□□□□ 0.02
NTN3O00634 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.15■□□□□ 0.02
NTN3O00634 AP000812.2-201ENST00000538934 718 ntBASIC15.15■□□□□ 0.02
NTN3O00634 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.15■□□□□ 0.02
NTN3O00634 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.15■□□□□ 0.02
NTN3O00634 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.15■□□□□ 0.02
NTN3O00634 AC009486.1-201ENST00000569860 813 ntBASIC15.15■□□□□ 0.02
NTN3O00634 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.15■□□□□ 0.02
NTN3O00634 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.15■□□□□ 0.02
NTN3O00634 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.15■□□□□ 0.02
NTN3O00634 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NTN3O00634 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.15■□□□□ 0.02
NTN3O00634 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.15■□□□□ 0.02
NTN3O00634 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.15■□□□□ 0.02
NTN3O00634 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.15■□□□□ 0.02
NTN3O00634 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NTN3O00634 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NTN3O00634 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NTN3O00634 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NTN3O00634 AC106820.2-201ENST00000563775 3264 ntBASIC15.14■□□□□ 0.01
NTN3O00634 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
NTN3O00634 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms