Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.53■□□□□ 0.08
PDLIM1O00151 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDLIM1O00151 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.53■□□□□ 0.08
PDLIM1O00151 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 NFIC-211ENST00000641145 8399 ntBASIC15.53■□□□□ 0.08
PDLIM1O00151 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDLIM1O00151 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDLIM1O00151 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDLIM1O00151 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PDLIM1O00151 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 AC004870.1-201ENST00000315132 882 ntBASIC15.53■□□□□ 0.08
PDLIM1O00151 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDLIM1O00151 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.53■□□□□ 0.08
PDLIM1O00151 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDLIM1O00151 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 TPM4P1-201ENST00000436100 807 ntBASIC15.53■□□□□ 0.08
PDLIM1O00151 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.53■□□□□ 0.08
PDLIM1O00151 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.53■□□□□ 0.08
PDLIM1O00151 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDLIM1O00151 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDLIM1O00151 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDLIM1O00151 AP001269.4-201ENST00000609611 512 ntBASIC15.53■□□□□ 0.08
PDLIM1O00151 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.53■□□□□ 0.08
PDLIM1O00151 AP000867.4-201ENST00000641616 219 ntBASIC15.53■□□□□ 0.08
PDLIM1O00151 SNX33P1-201ENST00000592116 1762 ntBASIC15.53■□□□□ 0.08
PDLIM1O00151 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDLIM1O00151 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.53■□□□□ 0.08
PDLIM1O00151 AL512652.2-201ENST00000625156 1716 ntBASIC15.53■□□□□ 0.08
PDLIM1O00151 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDLIM1O00151 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDLIM1O00151 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDLIM1O00151 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDLIM1O00151 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDLIM1O00151 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDLIM1O00151 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDLIM1O00151 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PDLIM1O00151 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PDLIM1O00151 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.52■□□□□ 0.08
PDLIM1O00151 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDLIM1O00151 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PDLIM1O00151 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.52■□□□□ 0.08
PDLIM1O00151 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
PDLIM1O00151 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDLIM1O00151 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.52■□□□□ 0.08
PDLIM1O00151 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
PDLIM1O00151 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PDLIM1O00151 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDLIM1O00151 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDLIM1O00151 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.52■□□□□ 0.08
PDLIM1O00151 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.52■□□□□ 0.08
PDLIM1O00151 AL031731.1-201ENST00000642131 2094 ntBASIC15.52■□□□□ 0.08
PDLIM1O00151 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.52■□□□□ 0.08
PDLIM1O00151 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDLIM1O00151 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
PDLIM1O00151 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PDLIM1O00151 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDLIM1O00151 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDLIM1O00151 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
PDLIM1O00151 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PDLIM1O00151 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PDLIM1O00151 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
PDLIM1O00151 RBM17P3-201ENST00000417687 1192 ntBASIC15.52■□□□□ 0.08
PDLIM1O00151 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.52■□□□□ 0.08
PDLIM1O00151 AF238378.1-201ENST00000526806 358 ntBASIC15.52■□□□□ 0.08
PDLIM1O00151 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.52■□□□□ 0.08
PDLIM1O00151 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.52■□□□□ 0.08
PDLIM1O00151 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.52■□□□□ 0.08
PDLIM1O00151 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.52■□□□□ 0.08
PDLIM1O00151 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.52■□□□□ 0.08
PDLIM1O00151 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.52■□□□□ 0.08
PDLIM1O00151 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PDLIM1O00151 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PDLIM1O00151 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDLIM1O00151 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDLIM1O00151 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.52■□□□□ 0.07
PDLIM1O00151 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PDLIM1O00151 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDLIM1O00151 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDLIM1O00151 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
PDLIM1O00151 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.52■□□□□ 0.07
PDLIM1O00151 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
PDLIM1O00151 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
PDLIM1O00151 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.51■□□□□ 0.07
PDLIM1O00151 AP005117.1-201ENST00000584346 1413 ntBASIC15.51■□□□□ 0.07
PDLIM1O00151 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDLIM1O00151 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PDLIM1O00151 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDLIM1O00151 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms