Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 TOMM22P5-201ENST00000416399 439 ntBASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 RN7SL399P-201ENST00000471648 279 ntBASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 IGHV3-71-201ENST00000523324 359 ntBASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 AC097359.3-201ENST00000603982 1210 ntBASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC144AA2RUR9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 AL442647.2-201ENST00000429864 857 ntBASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 USP40-206ENST00000443711 628 ntTSL 2 BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 NEU3-203ENST00000529024 581 ntTSL 3 BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 AC106886.1-201ENST00000568660 600 ntBASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 AL162274.1-201ENST00000617191 1098 ntBASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 MTHFR-217ENST00000641820 1569 ntBASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC144AA2RUR9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC23.02■■□□□ 1.27
CCDC144AA2RUR9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 AC104596.2-201ENST00000512793 793 ntBASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC144AA2RUR9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC23■■□□□ 1.27
CCDC144AA2RUR9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC144AA2RUR9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC144AA2RUR9 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CCDC144AA2RUR9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC23■■□□□ 1.27
CCDC144AA2RUR9 MXI1-205ENST00000393134 889 ntTSL 2 BASIC23■■□□□ 1.27
CCDC144AA2RUR9 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC144AA2RUR9 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC144AA2RUR9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC23■■□□□ 1.27
CCDC144AA2RUR9 ACA64.2-201ENST00000459014 129 ntBASIC23■■□□□ 1.27
CCDC144AA2RUR9 AC022494.1-201ENST00000466044 728 ntBASIC23■■□□□ 1.27
CCDC144AA2RUR9 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC144AA2RUR9 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC144AA2RUR9 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC23■■□□□ 1.27
CCDC144AA2RUR9 BRI3BPP1-201ENST00000594224 787 ntBASIC23■■□□□ 1.27
CCDC144AA2RUR9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
CCDC144AA2RUR9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC144AA2RUR9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms