Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 Z93015.1-201ENST00000451718 390 ntBASIC18.54■□□□□ 0.56
SSC5DA1L4H1 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 ACTG1P17-201ENST00000558391 1119 ntBASIC18.54■□□□□ 0.56
SSC5DA1L4H1 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 AC138951.2-201ENST00000623455 1161 ntBASIC18.54■□□□□ 0.56
SSC5DA1L4H1 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 AC005052.1-201ENST00000625181 2492 ntBASIC18.54■□□□□ 0.56
SSC5DA1L4H1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 AL138709.1-201ENST00000614840 1693 ntBASIC18.54■□□□□ 0.56
SSC5DA1L4H1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSC5DA1L4H1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 AC006001.1-201ENST00000325130 474 ntBASIC18.53■□□□□ 0.56
SSC5DA1L4H1 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 C2orf27AP3-201ENST00000434123 579 ntBASIC18.53■□□□□ 0.56
SSC5DA1L4H1 AC104306.2-201ENST00000451877 341 ntBASIC18.53■□□□□ 0.56
SSC5DA1L4H1 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.53■□□□□ 0.56
SSC5DA1L4H1 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.53■□□□□ 0.56
SSC5DA1L4H1 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 AL354718.3-201ENST00000616414 581 ntBASIC18.53■□□□□ 0.56
SSC5DA1L4H1 CR382287.1-201ENST00000623954 586 ntBASIC18.53■□□□□ 0.56
SSC5DA1L4H1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSC5DA1L4H1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSC5DA1L4H1 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSC5DA1L4H1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.52■□□□□ 0.56
SSC5DA1L4H1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSC5DA1L4H1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.52■□□□□ 0.56
SSC5DA1L4H1 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSC5DA1L4H1 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.52■□□□□ 0.56
SSC5DA1L4H1 AL591846.1-201ENST00000451736 433 ntBASIC18.52■□□□□ 0.56
SSC5DA1L4H1 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC18.52■□□□□ 0.56
SSC5DA1L4H1 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.52■□□□□ 0.56
SSC5DA1L4H1 MIR4741-201ENST00000579822 90 ntBASIC18.52■□□□□ 0.56
SSC5DA1L4H1 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSC5DA1L4H1 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.52■□□□□ 0.56
SSC5DA1L4H1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSC5DA1L4H1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.52■□□□□ 0.56
SSC5DA1L4H1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
SSC5DA1L4H1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.52■□□□□ 0.56
SSC5DA1L4H1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSC5DA1L4H1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSC5DA1L4H1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SSC5DA1L4H1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SSC5DA1L4H1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SSC5DA1L4H1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SSC5DA1L4H1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.52■□□□□ 0.55
SSC5DA1L4H1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SSC5DA1L4H1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SSC5DA1L4H1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SSC5DA1L4H1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SSC5DA1L4H1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
SSC5DA1L4H1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
SSC5DA1L4H1 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSC5DA1L4H1 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSC5DA1L4H1 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.51■□□□□ 0.55
SSC5DA1L4H1 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.51■□□□□ 0.55
SSC5DA1L4H1 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SSC5DA1L4H1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSC5DA1L4H1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSC5DA1L4H1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SSC5DA1L4H1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SSC5DA1L4H1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SSC5DA1L4H1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SSC5DA1L4H1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms