Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV18A0A075B6X5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 LINC00265-3P-201ENST00000447588 903 ntBASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 TSSC2-201ENST00000450217 709 ntBASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 AC074051.2-201ENST00000565115 352 ntBASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 AL139424.1-201ENST00000607572 797 ntBASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 AC138035.3-201ENST00000622706 2791 ntBASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV18A0A075B6X5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 CICP13-201ENST00000422015 2789 ntBASIC14□□□□□ -0.17
TRAV18A0A075B6X5 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 AL353732.1-201ENST00000569618 1459 ntBASIC14□□□□□ -0.17
TRAV18A0A075B6X5 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 AC087481.3-201ENST00000602886 1894 ntBASIC14□□□□□ -0.17
TRAV18A0A075B6X5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 AC087641.1-201ENST00000557561 1021 ntBASIC14□□□□□ -0.17
TRAV18A0A075B6X5 MIR5100-201ENST00000579544 119 ntBASIC14□□□□□ -0.17
TRAV18A0A075B6X5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 AL022326.1-202ENST00000641533 845 ntBASIC14□□□□□ -0.17
TRAV18A0A075B6X5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV18A0A075B6X5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms