Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
UBQLN2Q9UHD9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
UBQLN2Q9UHD9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
UBQLN2Q9UHD9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN2Q9UHD9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN2Q9UHD9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN2Q9UHD9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN2Q9UHD9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
UBQLN2Q9UHD9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.76■□□□□ 0.75
UBQLN2Q9UHD9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN2Q9UHD9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN2Q9UHD9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.76■□□□□ 0.75
UBQLN2Q9UHD9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
UBQLN2Q9UHD9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN2Q9UHD9 EP400NL-214ENST00000641289 2402 ntBASIC19.76■□□□□ 0.75
UBQLN2Q9UHD9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN2Q9UHD9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBQLN2Q9UHD9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
UBQLN2Q9UHD9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.75■□□□□ 0.75
UBQLN2Q9UHD9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
UBQLN2Q9UHD9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
UBQLN2Q9UHD9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBQLN2Q9UHD9 AC044849.2-201ENST00000606596 710 ntBASIC19.75■□□□□ 0.75
UBQLN2Q9UHD9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN2Q9UHD9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
UBQLN2Q9UHD9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN2Q9UHD9 WHAMMP2-203ENST00000563942 1603 ntBASIC19.74■□□□□ 0.75
UBQLN2Q9UHD9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.74■□□□□ 0.75
UBQLN2Q9UHD9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UBQLN2Q9UHD9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.74■□□□□ 0.75
UBQLN2Q9UHD9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN2Q9UHD9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN2Q9UHD9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN2Q9UHD9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBQLN2Q9UHD9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UBQLN2Q9UHD9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN2Q9UHD9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN2Q9UHD9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
UBQLN2Q9UHD9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN2Q9UHD9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN2Q9UHD9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
UBQLN2Q9UHD9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
UBQLN2Q9UHD9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN2Q9UHD9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN2Q9UHD9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN2Q9UHD9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN2Q9UHD9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBQLN2Q9UHD9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBQLN2Q9UHD9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBQLN2Q9UHD9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.72■□□□□ 0.75
UBQLN2Q9UHD9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBQLN2Q9UHD9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.72■□□□□ 0.75
UBQLN2Q9UHD9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBQLN2Q9UHD9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.72■□□□□ 0.75
UBQLN2Q9UHD9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBQLN2Q9UHD9 AC142472.1-201ENST00000612013 1741 ntBASIC19.72■□□□□ 0.75
UBQLN2Q9UHD9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBQLN2Q9UHD9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBQLN2Q9UHD9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBQLN2Q9UHD9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBQLN2Q9UHD9 AP003733.4-201ENST00000623785 1697 ntBASIC19.71■□□□□ 0.75
UBQLN2Q9UHD9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN2Q9UHD9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
UBQLN2Q9UHD9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN2Q9UHD9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN2Q9UHD9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN2Q9UHD9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
UBQLN2Q9UHD9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN2Q9UHD9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN2Q9UHD9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.71■□□□□ 0.75
UBQLN2Q9UHD9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN2Q9UHD9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.71■□□□□ 0.75
UBQLN2Q9UHD9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN2Q9UHD9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
UBQLN2Q9UHD9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBQLN2Q9UHD9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN2Q9UHD9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN2Q9UHD9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.7■□□□□ 0.74
UBQLN2Q9UHD9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN2Q9UHD9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.7■□□□□ 0.74
UBQLN2Q9UHD9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN2Q9UHD9 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN2Q9UHD9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.7■□□□□ 0.74
UBQLN2Q9UHD9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN2Q9UHD9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.7■□□□□ 0.74
UBQLN2Q9UHD9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN2Q9UHD9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.69■□□□□ 0.74
UBQLN2Q9UHD9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
UBQLN2Q9UHD9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN2Q9UHD9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN2Q9UHD9 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
UBQLN2Q9UHD9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN2Q9UHD9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.69■□□□□ 0.74
UBQLN2Q9UHD9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN2Q9UHD9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN2Q9UHD9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN2Q9UHD9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN2Q9UHD9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
UBQLN2Q9UHD9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN2Q9UHD9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms