Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SND1-IT1Q9HBX3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SND1-IT1Q9HBX3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC15.69■□□□□ 0.1
SND1-IT1Q9HBX3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SND1-IT1Q9HBX3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SND1-IT1Q9HBX3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SND1-IT1Q9HBX3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC15.69■□□□□ 0.1
SND1-IT1Q9HBX3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SND1-IT1Q9HBX3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SND1-IT1Q9HBX3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SND1-IT1Q9HBX3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SND1-IT1Q9HBX3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SND1-IT1Q9HBX3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC15.68■□□□□ 0.1
SND1-IT1Q9HBX3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SND1-IT1Q9HBX3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
SND1-IT1Q9HBX3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SND1-IT1Q9HBX3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SND1-IT1Q9HBX3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SND1-IT1Q9HBX3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SND1-IT1Q9HBX3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SND1-IT1Q9HBX3 DUSP8P5-201ENST00000422884 1815 ntBASIC15.68■□□□□ 0.1
SND1-IT1Q9HBX3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SND1-IT1Q9HBX3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SND1-IT1Q9HBX3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC15.67■□□□□ 0.1
SND1-IT1Q9HBX3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC15.67■□□□□ 0.1
SND1-IT1Q9HBX3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SND1-IT1Q9HBX3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC15.67■□□□□ 0.1
SND1-IT1Q9HBX3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SND1-IT1Q9HBX3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SND1-IT1Q9HBX3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SND1-IT1Q9HBX3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SND1-IT1Q9HBX3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC15.66■□□□□ 0.1
SND1-IT1Q9HBX3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SND1-IT1Q9HBX3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC15.66■□□□□ 0.1
SND1-IT1Q9HBX3 CHML-204ENST00000638121 920 ntTSL 2 BASIC15.66■□□□□ 0.1
SND1-IT1Q9HBX3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SND1-IT1Q9HBX3 AC141586.4-201ENST00000624558 1573 ntBASIC15.66■□□□□ 0.1
SND1-IT1Q9HBX3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC15.66■□□□□ 0.1
SND1-IT1Q9HBX3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SND1-IT1Q9HBX3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SND1-IT1Q9HBX3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC15.65■□□□□ 0.1
SND1-IT1Q9HBX3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SND1-IT1Q9HBX3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SND1-IT1Q9HBX3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SND1-IT1Q9HBX3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SND1-IT1Q9HBX3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SND1-IT1Q9HBX3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SND1-IT1Q9HBX3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SND1-IT1Q9HBX3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
SND1-IT1Q9HBX3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SND1-IT1Q9HBX3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC15.64■□□□□ 0.09
SND1-IT1Q9HBX3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SND1-IT1Q9HBX3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SND1-IT1Q9HBX3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SND1-IT1Q9HBX3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 AC008813.1-201ENST00000536597 885 ntBASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 MIR219A2-201ENST00000608502 1504 ntBASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC15.63■□□□□ 0.09
SND1-IT1Q9HBX3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SND1-IT1Q9HBX3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SND1-IT1Q9HBX3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SND1-IT1Q9HBX3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SND1-IT1Q9HBX3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC15.62■□□□□ 0.09
SND1-IT1Q9HBX3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SND1-IT1Q9HBX3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SND1-IT1Q9HBX3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SND1-IT1Q9HBX3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SND1-IT1Q9HBX3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC15.61■□□□□ 0.09
SND1-IT1Q9HBX3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SND1-IT1Q9HBX3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SND1-IT1Q9HBX3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SND1-IT1Q9HBX3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC15.61■□□□□ 0.09
SND1-IT1Q9HBX3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SND1-IT1Q9HBX3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SND1-IT1Q9HBX3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SND1-IT1Q9HBX3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SND1-IT1Q9HBX3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC15.61■□□□□ 0.09
SND1-IT1Q9HBX3 AL359258.2-201ENST00000564063 1566 ntBASIC15.61■□□□□ 0.09
SND1-IT1Q9HBX3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.61■□□□□ 0.09
SND1-IT1Q9HBX3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SND1-IT1Q9HBX3 AL359504.2-201ENST00000605506 1601 ntBASIC15.61■□□□□ 0.09
SND1-IT1Q9HBX3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
SND1-IT1Q9HBX3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms