Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CNOT9Q92600 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNOT9Q92600 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.7■■□□□ 1.06
CNOT9Q92600 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNOT9Q92600 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNOT9Q92600 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CNOT9Q92600 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT9Q92600 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.69■■□□□ 1.06
CNOT9Q92600 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT9Q92600 KRT18P10-201ENST00000388836 1287 ntBASIC21.69■■□□□ 1.06
CNOT9Q92600 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT9Q92600 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT9Q92600 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CNOT9Q92600 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT9Q92600 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CNOT9Q92600 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.68■■□□□ 1.06
CNOT9Q92600 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT9Q92600 AL139125.2-201ENST00000623134 1869 ntBASIC21.68■■□□□ 1.06
CNOT9Q92600 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT9Q92600 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT9Q92600 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.67■■□□□ 1.06
CNOT9Q92600 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.67■■□□□ 1.06
CNOT9Q92600 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT9Q92600 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT9Q92600 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT9Q92600 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNOT9Q92600 AC018755.3-202ENST00000596210 929 ntBASIC21.66■■□□□ 1.06
CNOT9Q92600 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNOT9Q92600 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNOT9Q92600 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNOT9Q92600 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.66■■□□□ 1.06
CNOT9Q92600 AP003733.4-201ENST00000623785 1697 ntBASIC21.66■■□□□ 1.06
CNOT9Q92600 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CNOT9Q92600 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNOT9Q92600 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.65■■□□□ 1.06
CNOT9Q92600 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNOT9Q92600 DUX4L9-201ENST00000449051 1259 ntBASIC21.65■■□□□ 1.06
CNOT9Q92600 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.65■■□□□ 1.06
CNOT9Q92600 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.65■■□□□ 1.06
CNOT9Q92600 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNOT9Q92600 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNOT9Q92600 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
CNOT9Q92600 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CNOT9Q92600 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CNOT9Q92600 AC093323.1-202ENST00000635031 2045 ntBASIC21.64■■□□□ 1.05
CNOT9Q92600 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNOT9Q92600 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.64■■□□□ 1.05
CNOT9Q92600 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.64■■□□□ 1.05
CNOT9Q92600 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
CNOT9Q92600 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.64■■□□□ 1.05
CNOT9Q92600 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.64■■□□□ 1.05
CNOT9Q92600 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNOT9Q92600 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT9Q92600 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT9Q92600 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.63■■□□□ 1.05
CNOT9Q92600 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT9Q92600 KRT18P60-201ENST00000312876 1297 ntBASIC21.63■■□□□ 1.05
CNOT9Q92600 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT9Q92600 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.63■■□□□ 1.05
CNOT9Q92600 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT9Q92600 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.63■■□□□ 1.05
CNOT9Q92600 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT9Q92600 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNOT9Q92600 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CNOT9Q92600 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CNOT9Q92600 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNOT9Q92600 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNOT9Q92600 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.62■■□□□ 1.05
CNOT9Q92600 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.62■■□□□ 1.05
CNOT9Q92600 RPS2P7-201ENST00000447334 885 ntBASIC21.62■■□□□ 1.05
CNOT9Q92600 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CNOT9Q92600 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNOT9Q92600 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.62■■□□□ 1.05
CNOT9Q92600 FOXO3B-201ENST00000395675 1928 ntBASIC21.61■■□□□ 1.05
CNOT9Q92600 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CNOT9Q92600 ABHD17AP5-201ENST00000580133 923 ntBASIC21.61■■□□□ 1.05
CNOT9Q92600 MIR6765-201ENST00000614092 87 ntBASIC21.61■■□□□ 1.05
CNOT9Q92600 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNOT9Q92600 AC129492.7-201ENST00000622992 756 ntBASIC21.61■■□□□ 1.05
CNOT9Q92600 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNOT9Q92600 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.6■■□□□ 1.05
CNOT9Q92600 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNOT9Q92600 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNOT9Q92600 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CNOT9Q92600 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.6■■□□□ 1.05
CNOT9Q92600 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNOT9Q92600 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNOT9Q92600 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNOT9Q92600 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNOT9Q92600 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.59■■□□□ 1.05
CNOT9Q92600 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
CNOT9Q92600 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNOT9Q92600 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CNOT9Q92600 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.58■■□□□ 1.05
CNOT9Q92600 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.58■■□□□ 1.05
CNOT9Q92600 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNOT9Q92600 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.58■■□□□ 1.05
CNOT9Q92600 MIR6089-201ENST00000616698 64 ntBASIC21.58■■□□□ 1.05
CNOT9Q92600 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.58■■□□□ 1.05
CNOT9Q92600 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms