Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 PFA3YNL326C 1011 nt7.8□□□□□ -1.16
SSM4P40318 UBC4YBR082C 447 nt7.8□□□□□ -1.16
SSM4P40318 PHO8YDR481C 1701 nt7.8□□□□□ -1.16
SSM4P40318 RRT2YBR246W 1164 nt7.79□□□□□ -1.16
SSM4P40318 ALT1YLR089C 1779 nt7.79□□□□□ -1.16
SSM4P40318 GAA1YLR088W 1845 nt7.78□□□□□ -1.16
SSM4P40318 CHO1YER026C 831 nt7.78□□□□□ -1.16
SSM4P40318 YLR118CYLR118C 684 nt7.78□□□□□ -1.16
SSM4P40318 DAL3YIR032C 588 nt7.78□□□□□ -1.16
SSM4P40318 NTE1YML059C 5040 nt7.77□□□□□ -1.17
SSM4P40318 UBP13YBL067C 2244 nt7.77□□□□□ -1.17
SSM4P40318 TOS4YLR183C 1470 nt7.77□□□□□ -1.17
SSM4P40318 LDB18YLL049W 540 nt7.77□□□□□ -1.17
SSM4P40318 ROX3YBL093C 663 nt7.77□□□□□ -1.17
SSM4P40318 PSH1YOL054W 1221 nt7.77□□□□□ -1.17
SSM4P40318 RER2YBR002C 861 nt7.77□□□□□ -1.17
SSM4P40318 PDH1YPR002W 1551 nt7.76□□□□□ -1.17
SSM4P40318 GEP3YOR205C 1671 nt7.76□□□□□ -1.17
SSM4P40318 MND2YIR025W 1107 nt7.76□□□□□ -1.17
SSM4P40318 YJR015WYJR015W 1533 nt7.76□□□□□ -1.17
SSM4P40318 GUT1YHL032C 2130 nt7.75□□□□□ -1.17
SSM4P40318 YGL036WYGL036W 2730 nt7.75□□□□□ -1.17
SSM4P40318 GEX1YCL073C 1848 nt7.75□□□□□ -1.17
SSM4P40318 GEX2YKR106W 1848 nt7.75□□□□□ -1.17
SSM4P40318 YBL044WYBL044W 369 nt7.75□□□□□ -1.17
SSM4P40318 CBC2YPL178W 627 nt7.75□□□□□ -1.17
SSM4P40318 HXT3YDR345C 1704 nt7.75□□□□□ -1.17
SSM4P40318 NOB1YOR056C 1380 nt7.75□□□□□ -1.17
SSM4P40318 NOG2YNR053C 1461 nt7.74□□□□□ -1.17
SSM4P40318 DFG5YMR238W 1377 nt7.74□□□□□ -1.17
SSM4P40318 MMP1YLL061W 1752 nt7.73□□□□□ -1.17
SSM4P40318 SOG2YOR353C 2376 nt7.73□□□□□ -1.17
SSM4P40318 ASH1YKL185W 1767 nt7.73□□□□□ -1.17
SSM4P40318 YPR098CYPR098C 486 nt7.73□□□□□ -1.17
SSM4P40318 ADE13YLR359W 1449 nt7.72□□□□□ -1.17
SSM4P40318 ICE2YIL090W 1476 nt7.72□□□□□ -1.17
SSM4P40318 VMA16YHR026W 642 nt7.72□□□□□ -1.17
SSM4P40318 PUS5YLR165C 765 nt7.72□□□□□ -1.17
SSM4P40318 YCL041CYCL041C 495 nt7.72□□□□□ -1.17
SSM4P40318 PTK2YJR059W 2457 nt7.71□□□□□ -1.17
SSM4P40318 SIP2YGL208W 1248 nt7.71□□□□□ -1.18
SSM4P40318 RMA1YKL132C 1293 nt7.71□□□□□ -1.18
SSM4P40318 SEC12YNR026C 1416 nt7.71□□□□□ -1.18
SSM4P40318 HRP1YOL123W 1605 nt7.7□□□□□ -1.18
SSM4P40318 AMA1YGR225W 1782 nt7.7□□□□□ -1.18
SSM4P40318 YFL064CYFL064C 525 nt7.7□□□□□ -1.18
SSM4P40318 YGR182CYGR182C 354 nt7.7□□□□□ -1.18
SSM4P40318 GON7YJL184W 372 nt7.7□□□□□ -1.18
SSM4P40318 ERG3YLR056W 1098 nt7.7□□□□□ -1.18
SSM4P40318 YPR202WYPR202W 717 nt7.7□□□□□ -1.18
SSM4P40318 SGV1YPR161C 1974 nt7.7□□□□□ -1.18
SSM4P40318 YEL023CYEL023C 2049 nt7.69□□□□□ -1.18
SSM4P40318 HMS2YJR147W 1077 nt7.69□□□□□ -1.18
SSM4P40318 SSO1YPL232W 873 nt7.69□□□□□ -1.18
SSM4P40318 BBP1YPL255W 1158 nt7.69□□□□□ -1.18
SSM4P40318 HFI1YPL254W 1467 nt7.69□□□□□ -1.18
SSM4P40318 GAT4YIR013C 366 nt7.68□□□□□ -1.18
SSM4P40318 ETR1YBR026C 1143 nt7.68□□□□□ -1.18
SSM4P40318 SAM4YPL273W 978 nt7.68□□□□□ -1.18
SSM4P40318 UTP18YJL069C 1785 nt7.67□□□□□ -1.18
SSM4P40318 GET3YDL100C 1065 nt7.67□□□□□ -1.18
SSM4P40318 SCM3YDL139C 672 nt7.67□□□□□ -1.18
SSM4P40318 YDR541CYDR541C 1035 nt7.67□□□□□ -1.18
SSM4P40318 RHO2YNL090W 579 nt7.67□□□□□ -1.18
SSM4P40318 YPL062WYPL062W 405 nt7.67□□□□□ -1.18
SSM4P40318 TRP5YGL026C 2124 nt7.67□□□□□ -1.18
SSM4P40318 RMD9YGL107C 1941 nt7.66□□□□□ -1.18
SSM4P40318 FHN1YGR131W 525 nt7.66□□□□□ -1.18
SSM4P40318 SCW4YGR279C 1161 nt7.66□□□□□ -1.18
SSM4P40318 SCT1YBL011W 2280 nt7.66□□□□□ -1.18
SSM4P40318 DPH2YKL191W 1605 nt7.66□□□□□ -1.18
SSM4P40318 YJL068CYJL068C 900 nt7.65□□□□□ -1.18
SSM4P40318 CBF1YJR060W 1056 nt7.65□□□□□ -1.18
SSM4P40318 PGA2YNL149C 390 nt7.65□□□□□ -1.18
SSM4P40318 SER1YOR184W 1188 nt7.65□□□□□ -1.18
SSM4P40318 YOR300WYOR300W 309 nt7.65□□□□□ -1.18
SSM4P40318 RET1YOR207C 3450 nt7.65□□□□□ -1.19
SSM4P40318 THI21YPL258C 1656 nt7.65□□□□□ -1.19
SSM4P40318 YPL277CYPL277C 1464 nt7.64□□□□□ -1.19
SSM4P40318 HAS1YMR290C 1518 nt7.63□□□□□ -1.19
SSM4P40318 CSM2YIL132C 642 nt7.63□□□□□ -1.19
SSM4P40318 PRM10YJL108C 1152 nt7.63□□□□□ -1.19
SSM4P40318 MTC1YJL123C 1437 nt7.63□□□□□ -1.19
SSM4P40318 YMR155WYMR155W 1644 nt7.63□□□□□ -1.19
SSM4P40318 YIL055CYIL055C 1884 nt7.62□□□□□ -1.19
SSM4P40318 MAK32YCR019W 1092 nt7.62□□□□□ -1.19
SSM4P40318 QRI1YDL103C 1434 nt7.62□□□□□ -1.19
SSM4P40318 RSA4YCR072C 1548 nt7.62□□□□□ -1.19
SSM4P40318 KTR5YNL029C 1569 nt7.62□□□□□ -1.19
SSM4P40318 ATP14YLR295C 375 nt7.6□□□□□ -1.19
SSM4P40318 NDC1YML031W 1968 nt7.6□□□□□ -1.19
SSM4P40318 ULA1YPL003W 1389 nt7.59□□□□□ -1.19
SSM4P40318 STF1YDL130W-A 261 nt7.59□□□□□ -1.19
SSM4P40318 YDR134CYDR134C 411 nt7.59□□□□□ -1.19
SSM4P40318 RPL21BYPL079W 483 nt7.59□□□□□ -1.19
SSM4P40318 MHR1YDR296W 681 nt7.58□□□□□ -1.2
SSM4P40318 YIL060WYIL060W 435 nt7.58□□□□□ -1.2
SSM4P40318 QDR1YIL120W 1692 nt7.58□□□□□ -1.2
SSM4P40318 COQ6YGR255C 1440 nt7.58□□□□□ -1.2
SSM4P40318 NQM1YGR043C 1002 nt7.57□□□□□ -1.2
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms