Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CD40P25942 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD40P25942 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CD40P25942 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CD40P25942 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CD40P25942 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD40P25942 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD40P25942 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CD40P25942 KRT125P-201ENST00000546827 989 ntBASIC20.44■□□□□ 0.86
CD40P25942 AC011551.1-201ENST00000614101 683 ntBASIC20.44■□□□□ 0.86
CD40P25942 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.44■□□□□ 0.86
CD40P25942 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD40P25942 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD40P25942 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD40P25942 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD40P25942 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
CD40P25942 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CD40P25942 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD40P25942 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.43■□□□□ 0.86
CD40P25942 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD40P25942 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD40P25942 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD40P25942 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD40P25942 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD40P25942 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD40P25942 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.42■□□□□ 0.86
CD40P25942 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.42■□□□□ 0.86
CD40P25942 AC137630.3-201ENST00000607245 391 ntBASIC20.42■□□□□ 0.86
CD40P25942 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.42■□□□□ 0.86
CD40P25942 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CD40P25942 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.42■□□□□ 0.86
CD40P25942 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CD40P25942 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD40P25942 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD40P25942 MIR4281-201ENST00000580852 62 ntBASIC20.41■□□□□ 0.86
CD40P25942 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.41■□□□□ 0.86
CD40P25942 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD40P25942 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD40P25942 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD40P25942 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
CD40P25942 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.41■□□□□ 0.86
CD40P25942 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CD40P25942 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD40P25942 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD40P25942 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD40P25942 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CD40P25942 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.4■□□□□ 0.86
CD40P25942 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD40P25942 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CD40P25942 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD40P25942 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.39■□□□□ 0.85
CD40P25942 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD40P25942 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CD40P25942 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.39■□□□□ 0.85
CD40P25942 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.39■□□□□ 0.85
CD40P25942 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.39■□□□□ 0.85
CD40P25942 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.39■□□□□ 0.85
CD40P25942 MIR4787-201ENST00000607364 84 ntBASIC20.39■□□□□ 0.85
CD40P25942 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.39■□□□□ 0.85
CD40P25942 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD40P25942 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD40P25942 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD40P25942 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.38■□□□□ 0.85
CD40P25942 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD40P25942 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.38■□□□□ 0.85
CD40P25942 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
CD40P25942 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CD40P25942 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD40P25942 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CD40P25942 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.37■□□□□ 0.85
CD40P25942 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.37■□□□□ 0.85
CD40P25942 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD40P25942 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.37■□□□□ 0.85
CD40P25942 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD40P25942 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.37■□□□□ 0.85
CD40P25942 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.37■□□□□ 0.85
CD40P25942 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD40P25942 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD40P25942 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.36■□□□□ 0.85
CD40P25942 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD40P25942 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CD40P25942 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.36■□□□□ 0.85
CD40P25942 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.36■□□□□ 0.85
CD40P25942 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD40P25942 AC021242.3-201ENST00000607598 1377 ntBASIC20.35■□□□□ 0.85
CD40P25942 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD40P25942 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD40P25942 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD40P25942 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD40P25942 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
CD40P25942 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.35■□□□□ 0.85
CD40P25942 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CD40P25942 DUSP8P4-201ENST00000399538 1761 ntBASIC20.35■□□□□ 0.85
CD40P25942 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CD40P25942 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.35■□□□□ 0.85
CD40P25942 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CD40P25942 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.34■□□□□ 0.85
CD40P25942 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD40P25942 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.34■□□□□ 0.85
CD40P25942 AL356441.2-201ENST00000443009 864 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms