Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL3L1P16619 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCL3L1P16619 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.49■□□□□ 0.71
CCL3L1P16619 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL3L1P16619 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCL3L1P16619 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
CCL3L1P16619 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL3L1P16619 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL3L1P16619 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL3L1P16619 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.48■□□□□ 0.71
CCL3L1P16619 FOXO3B-201ENST00000395675 1928 ntBASIC19.48■□□□□ 0.71
CCL3L1P16619 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL3L1P16619 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCL3L1P16619 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL3L1P16619 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL3L1P16619 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL3L1P16619 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL3L1P16619 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCL3L1P16619 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCL3L1P16619 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL3L1P16619 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CCL3L1P16619 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCL3L1P16619 PVT1_1.1-201ENST00000615125 194 ntBASIC19.47■□□□□ 0.71
CCL3L1P16619 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.47■□□□□ 0.71
CCL3L1P16619 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.47■□□□□ 0.71
CCL3L1P16619 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCL3L1P16619 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCL3L1P16619 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL3L1P16619 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL3L1P16619 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL3L1P16619 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CCL3L1P16619 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL3L1P16619 AC074183.2-201ENST00000623112 922 ntBASIC19.46■□□□□ 0.71
CCL3L1P16619 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL3L1P16619 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCL3L1P16619 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL3L1P16619 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL3L1P16619 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL3L1P16619 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.45■□□□□ 0.7
CCL3L1P16619 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCL3L1P16619 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL3L1P16619 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCL3L1P16619 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.45■□□□□ 0.7
CCL3L1P16619 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCL3L1P16619 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCL3L1P16619 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCL3L1P16619 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCL3L1P16619 AC022211.4-201ENST00000625094 2161 ntBASIC19.44■□□□□ 0.7
CCL3L1P16619 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CCL3L1P16619 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCL3L1P16619 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.44■□□□□ 0.7
CCL3L1P16619 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.44■□□□□ 0.7
CCL3L1P16619 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.44■□□□□ 0.7
CCL3L1P16619 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCL3L1P16619 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCL3L1P16619 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL3L1P16619 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL3L1P16619 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.44■□□□□ 0.7
CCL3L1P16619 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL3L1P16619 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL3L1P16619 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL3L1P16619 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL3L1P16619 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL3L1P16619 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL3L1P16619 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.43■□□□□ 0.7
CCL3L1P16619 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL3L1P16619 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCL3L1P16619 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL3L1P16619 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL3L1P16619 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCL3L1P16619 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.42■□□□□ 0.7
CCL3L1P16619 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.42■□□□□ 0.7
CCL3L1P16619 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL3L1P16619 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL3L1P16619 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.42■□□□□ 0.7
CCL3L1P16619 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL3L1P16619 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL3L1P16619 KRT8P33-201ENST00000508125 1423 ntBASIC19.42■□□□□ 0.7
CCL3L1P16619 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL3L1P16619 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCL3L1P16619 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL3L1P16619 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL3L1P16619 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCL3L1P16619 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL3L1P16619 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL3L1P16619 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL3L1P16619 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.41■□□□□ 0.7
CCL3L1P16619 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.41■□□□□ 0.7
CCL3L1P16619 AC019171.1-201ENST00000601251 1056 ntBASIC19.41■□□□□ 0.7
CCL3L1P16619 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.41■□□□□ 0.7
CCL3L1P16619 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL3L1P16619 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL3L1P16619 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL3L1P16619 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCL3L1P16619 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL3L1P16619 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL3L1P16619 AL592295.1-201ENST00000400984 884 ntBASIC19.4■□□□□ 0.7
CCL3L1P16619 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.4■□□□□ 0.7
CCL3L1P16619 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.4■□□□□ 0.7
CCL3L1P16619 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms