Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DPB1P04440 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.11■□□□□ 0.97
HLA-DPB1P04440 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DPB1P04440 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DPB1P04440 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DPB1P04440 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DPB1P04440 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DPB1P04440 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.1■□□□□ 0.97
HLA-DPB1P04440 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
HLA-DPB1P04440 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DPB1P04440 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.1■□□□□ 0.97
HLA-DPB1P04440 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DPB1P04440 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DPB1P04440 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DPB1P04440 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DPB1P04440 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
HLA-DPB1P04440 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.09■□□□□ 0.97
HLA-DPB1P04440 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HLA-DPB1P04440 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DPB1P04440 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.08■□□□□ 0.97
HLA-DPB1P04440 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HLA-DPB1P04440 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.08■□□□□ 0.97
HLA-DPB1P04440 AC126177.7-201ENST00000547904 679 ntBASIC21.08■□□□□ 0.97
HLA-DPB1P04440 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.08■□□□□ 0.97
HLA-DPB1P04440 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.08■□□□□ 0.97
HLA-DPB1P04440 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HLA-DPB1P04440 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HLA-DPB1P04440 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
HLA-DPB1P04440 AC141586.4-201ENST00000624558 1573 ntBASIC21.07■□□□□ 0.96
HLA-DPB1P04440 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DPB1P04440 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.07■□□□□ 0.96
HLA-DPB1P04440 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DPB1P04440 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DPB1P04440 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DPB1P04440 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
HLA-DPB1P04440 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.07■□□□□ 0.96
HLA-DPB1P04440 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.07■□□□□ 0.96
HLA-DPB1P04440 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HLA-DPB1P04440 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DPB1P04440 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DPB1P04440 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DPB1P04440 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HLA-DPB1P04440 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DPB1P04440 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HLA-DPB1P04440 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
HLA-DPB1P04440 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DPB1P04440 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
HLA-DPB1P04440 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DPB1P04440 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DPB1P04440 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.05■□□□□ 0.96
HLA-DPB1P04440 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
HLA-DPB1P04440 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DPB1P04440 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HLA-DPB1P04440 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
HLA-DPB1P04440 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DPB1P04440 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
HLA-DPB1P04440 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.04■□□□□ 0.96
HLA-DPB1P04440 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DPB1P04440 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.04■□□□□ 0.96
HLA-DPB1P04440 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
HLA-DPB1P04440 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HLA-DPB1P04440 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HLA-DPB1P04440 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.04■□□□□ 0.96
HLA-DPB1P04440 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DPB1P04440 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DPB1P04440 AC022413.1-201ENST00000624602 984 ntBASIC21.03■□□□□ 0.96
HLA-DPB1P04440 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DPB1P04440 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HLA-DPB1P04440 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.02■□□□□ 0.96
HLA-DPB1P04440 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.02■□□□□ 0.96
HLA-DPB1P04440 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DPB1P04440 AC060814.1-201ENST00000554326 538 ntBASIC21.02■□□□□ 0.96
HLA-DPB1P04440 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DPB1P04440 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DPB1P04440 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HLA-DPB1P04440 AC079834.2-201ENST00000609776 1949 ntBASIC21.02■□□□□ 0.95
HLA-DPB1P04440 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DPB1P04440 SLC6A10P-202ENST00000431994 2058 ntBASIC21.01■□□□□ 0.95
HLA-DPB1P04440 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DPB1P04440 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DPB1P04440 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DPB1P04440 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
HLA-DPB1P04440 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DPB1P04440 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DPB1P04440 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
HLA-DPB1P04440 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
HLA-DPB1P04440 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.01■□□□□ 0.95
HLA-DPB1P04440 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
HLA-DPB1P04440 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DPB1P04440 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21■□□□□ 0.95
HLA-DPB1P04440 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DPB1P04440 DUSP8P5-201ENST00000422884 1815 ntBASIC21■□□□□ 0.95
HLA-DPB1P04440 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DPB1P04440 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21■□□□□ 0.95
HLA-DPB1P04440 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
HLA-DPB1P04440 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21■□□□□ 0.95
HLA-DPB1P04440 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DPB1P04440 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HLA-DPB1P04440 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21■□□□□ 0.95
HLA-DPB1P04440 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms