Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LCATP04180 U85056.1-201ENST00000616429 682 ntBASIC20.55■□□□□ 0.88
LCATP04180 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.55■□□□□ 0.88
LCATP04180 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LCATP04180 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LCATP04180 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.54■□□□□ 0.88
LCATP04180 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
LCATP04180 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LCATP04180 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.54■□□□□ 0.88
LCATP04180 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LCATP04180 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
LCATP04180 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.54■□□□□ 0.88
LCATP04180 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LCATP04180 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LCATP04180 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LCATP04180 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCATP04180 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCATP04180 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.53■□□□□ 0.88
LCATP04180 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LCATP04180 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LCATP04180 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCATP04180 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LCATP04180 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LCATP04180 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LCATP04180 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
LCATP04180 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LCATP04180 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LCATP04180 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
LCATP04180 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LCATP04180 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LCATP04180 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.51■□□□□ 0.87
LCATP04180 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LCATP04180 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.51■□□□□ 0.87
LCATP04180 SPCS2P3-201ENST00000500401 656 ntBASIC20.51■□□□□ 0.87
LCATP04180 ABHD17AP5-201ENST00000580133 923 ntBASIC20.51■□□□□ 0.87
LCATP04180 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.51■□□□□ 0.87
LCATP04180 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LCATP04180 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LCATP04180 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LCATP04180 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.5■□□□□ 0.87
LCATP04180 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.5■□□□□ 0.87
LCATP04180 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LCATP04180 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LCATP04180 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LCATP04180 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LCATP04180 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LCATP04180 DUX4L9-201ENST00000449051 1259 ntBASIC20.49■□□□□ 0.87
LCATP04180 MIR6765-201ENST00000614092 87 ntBASIC20.49■□□□□ 0.87
LCATP04180 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LCATP04180 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LCATP04180 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LCATP04180 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.48■□□□□ 0.87
LCATP04180 AP003733.4-201ENST00000623785 1697 ntBASIC20.48■□□□□ 0.87
LCATP04180 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LCATP04180 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LCATP04180 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LCATP04180 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.48■□□□□ 0.87
LCATP04180 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LCATP04180 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.48■□□□□ 0.87
LCATP04180 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LCATP04180 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LCATP04180 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LCATP04180 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LCATP04180 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LCATP04180 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LCATP04180 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LCATP04180 RPS2P7-201ENST00000447334 885 ntBASIC20.47■□□□□ 0.87
LCATP04180 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LCATP04180 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
LCATP04180 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LCATP04180 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.46■□□□□ 0.87
LCATP04180 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LCATP04180 KRT18P60-201ENST00000312876 1297 ntBASIC20.46■□□□□ 0.87
LCATP04180 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LCATP04180 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.46■□□□□ 0.87
LCATP04180 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LCATP04180 AC129492.7-201ENST00000622992 756 ntBASIC20.46■□□□□ 0.87
LCATP04180 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LCATP04180 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LCATP04180 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCATP04180 FOXO3B-201ENST00000395675 1928 ntBASIC20.45■□□□□ 0.86
LCATP04180 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.45■□□□□ 0.86
LCATP04180 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCATP04180 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
LCATP04180 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.45■□□□□ 0.86
LCATP04180 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LCATP04180 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LCATP04180 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.45■□□□□ 0.86
LCATP04180 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.45■□□□□ 0.86
LCATP04180 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LCATP04180 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LCATP04180 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.44■□□□□ 0.86
LCATP04180 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
LCATP04180 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LCATP04180 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.44■□□□□ 0.86
LCATP04180 NTF6A-201ENST00000591175 560 ntBASIC20.44■□□□□ 0.86
LCATP04180 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.44■□□□□ 0.86
LCATP04180 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LCATP04180 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LCATP04180 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms