Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GMDSO60547 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GMDSO60547 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GMDSO60547 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GMDSO60547 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.72■□□□□ 0.91
GMDSO60547 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GMDSO60547 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GMDSO60547 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GMDSO60547 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GMDSO60547 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
GMDSO60547 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GMDSO60547 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GMDSO60547 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GMDSO60547 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.71■□□□□ 0.91
GMDSO60547 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.71■□□□□ 0.91
GMDSO60547 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GMDSO60547 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.71■□□□□ 0.91
GMDSO60547 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.71■□□□□ 0.91
GMDSO60547 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GMDSO60547 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GMDSO60547 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.7■□□□□ 0.9
GMDSO60547 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GMDSO60547 RP9P-202ENST00000450133 1212 ntBASIC20.7■□□□□ 0.9
GMDSO60547 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.7■□□□□ 0.9
GMDSO60547 AC007029.1-201ENST00000604183 313 ntBASIC20.7■□□□□ 0.9
GMDSO60547 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
GMDSO60547 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GMDSO60547 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
GMDSO60547 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GMDSO60547 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GMDSO60547 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.69■□□□□ 0.9
GMDSO60547 HSD17B1P1-201ENST00000590052 955 ntBASIC20.69■□□□□ 0.9
GMDSO60547 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.69■□□□□ 0.9
GMDSO60547 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.69■□□□□ 0.9
GMDSO60547 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GMDSO60547 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.68■□□□□ 0.9
GMDSO60547 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
GMDSO60547 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GMDSO60547 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GMDSO60547 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GMDSO60547 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
GMDSO60547 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GMDSO60547 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GMDSO60547 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.68■□□□□ 0.9
GMDSO60547 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GMDSO60547 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.68■□□□□ 0.9
GMDSO60547 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GMDSO60547 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GMDSO60547 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GMDSO60547 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GMDSO60547 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GMDSO60547 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GMDSO60547 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GMDSO60547 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GMDSO60547 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.67■□□□□ 0.9
GMDSO60547 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
GMDSO60547 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.66■□□□□ 0.9
GMDSO60547 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.66■□□□□ 0.9
GMDSO60547 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.66■□□□□ 0.9
GMDSO60547 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.66■□□□□ 0.9
GMDSO60547 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GMDSO60547 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
GMDSO60547 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.66■□□□□ 0.9
GMDSO60547 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GMDSO60547 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GMDSO60547 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GMDSO60547 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GMDSO60547 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GMDSO60547 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
GMDSO60547 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GMDSO60547 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GMDSO60547 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
GMDSO60547 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.65■□□□□ 0.9
GMDSO60547 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GMDSO60547 AC068473.5-201ENST00000616428 2072 ntBASIC20.65■□□□□ 0.9
GMDSO60547 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.65■□□□□ 0.9
GMDSO60547 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.64■□□□□ 0.9
GMDSO60547 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GMDSO60547 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.64■□□□□ 0.89
GMDSO60547 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GMDSO60547 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GMDSO60547 AC093536.1-201ENST00000569153 554 ntBASIC20.64■□□□□ 0.89
GMDSO60547 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GMDSO60547 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GMDSO60547 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.64■□□□□ 0.89
GMDSO60547 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GMDSO60547 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GMDSO60547 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GMDSO60547 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
GMDSO60547 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GMDSO60547 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GMDSO60547 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.62■□□□□ 0.89
GMDSO60547 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
GMDSO60547 RARRES2P2-201ENST00000394842 485 ntBASIC20.62■□□□□ 0.89
GMDSO60547 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.62■□□□□ 0.89
GMDSO60547 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
GMDSO60547 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
GMDSO60547 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GMDSO60547 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GMDSO60547 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms