Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.74■□□□□ 0.91
SGCEO43556 SLC6A10P-202ENST00000431994 2058 ntBASIC20.74■□□□□ 0.91
SGCEO43556 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SGCEO43556 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SGCEO43556 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SGCEO43556 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SGCEO43556 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.73■□□□□ 0.91
SGCEO43556 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SGCEO43556 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SGCEO43556 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SGCEO43556 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SGCEO43556 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SGCEO43556 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SGCEO43556 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SGCEO43556 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SGCEO43556 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SGCEO43556 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SGCEO43556 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SGCEO43556 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SGCEO43556 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
SGCEO43556 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.71■□□□□ 0.91
SGCEO43556 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SGCEO43556 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.71■□□□□ 0.91
SGCEO43556 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SGCEO43556 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.71■□□□□ 0.91
SGCEO43556 SPCS2P3-201ENST00000500401 656 ntBASIC20.71■□□□□ 0.91
SGCEO43556 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SGCEO43556 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SGCEO43556 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SGCEO43556 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.71■□□□□ 0.91
SGCEO43556 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.7■□□□□ 0.91
SGCEO43556 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.7■□□□□ 0.9
SGCEO43556 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SGCEO43556 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SGCEO43556 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SGCEO43556 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.7■□□□□ 0.9
SGCEO43556 DUX4L9-201ENST00000449051 1259 ntBASIC20.7■□□□□ 0.9
SGCEO43556 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SGCEO43556 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SGCEO43556 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
SGCEO43556 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SGCEO43556 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SGCEO43556 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SGCEO43556 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.69■□□□□ 0.9
SGCEO43556 KRT18P60-201ENST00000312876 1297 ntBASIC20.69■□□□□ 0.9
SGCEO43556 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SGCEO43556 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.69■□□□□ 0.9
SGCEO43556 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SGCEO43556 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SGCEO43556 MIR6765-201ENST00000614092 87 ntBASIC20.69■□□□□ 0.9
SGCEO43556 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SGCEO43556 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SGCEO43556 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SGCEO43556 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SGCEO43556 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.68■□□□□ 0.9
SGCEO43556 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SGCEO43556 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.68■□□□□ 0.9
SGCEO43556 NTF6A-201ENST00000591175 560 ntBASIC20.68■□□□□ 0.9
SGCEO43556 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.68■□□□□ 0.9
SGCEO43556 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SGCEO43556 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SGCEO43556 AC138932.3-201ENST00000567634 1902 ntBASIC20.68■□□□□ 0.9
SGCEO43556 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.68■□□□□ 0.9
SGCEO43556 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SGCEO43556 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SGCEO43556 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.67■□□□□ 0.9
SGCEO43556 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SGCEO43556 RPS2P7-201ENST00000447334 885 ntBASIC20.67■□□□□ 0.9
SGCEO43556 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.67■□□□□ 0.9
SGCEO43556 AC129492.7-201ENST00000622992 756 ntBASIC20.67■□□□□ 0.9
SGCEO43556 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SGCEO43556 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
SGCEO43556 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SGCEO43556 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SGCEO43556 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SGCEO43556 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SGCEO43556 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SGCEO43556 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SGCEO43556 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SGCEO43556 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SGCEO43556 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SGCEO43556 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SGCEO43556 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SGCEO43556 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SGCEO43556 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.65■□□□□ 0.9
SGCEO43556 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SGCEO43556 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SGCEO43556 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SGCEO43556 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.64■□□□□ 0.89
SGCEO43556 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
SGCEO43556 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SGCEO43556 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SGCEO43556 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.63■□□□□ 0.89
SGCEO43556 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SGCEO43556 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.63■□□□□ 0.89
SGCEO43556 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SGCEO43556 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SGCEO43556 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.62■□□□□ 0.89
SGCEO43556 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SGCEO43556 FOXO3B-201ENST00000395675 1928 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms