Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHOXO15266 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHOXO15266 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SHOXO15266 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHOXO15266 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHOXO15266 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.93■□□□□ 0.78
SHOXO15266 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SHOXO15266 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHOXO15266 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SHOXO15266 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHOXO15266 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHOXO15266 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHOXO15266 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.92■□□□□ 0.78
SHOXO15266 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.92■□□□□ 0.78
SHOXO15266 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.92■□□□□ 0.78
SHOXO15266 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.92■□□□□ 0.78
SHOXO15266 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHOXO15266 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHOXO15266 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHOXO15266 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHOXO15266 AC142472.1-201ENST00000612013 1741 ntBASIC19.91■□□□□ 0.78
SHOXO15266 RNF165-205ENST00000588679 2904 ntBASIC19.91■□□□□ 0.78
SHOXO15266 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHOXO15266 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.91■□□□□ 0.78
SHOXO15266 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.91■□□□□ 0.78
SHOXO15266 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHOXO15266 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.91■□□□□ 0.78
SHOXO15266 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SHOXO15266 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.91■□□□□ 0.78
SHOXO15266 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHOXO15266 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SHOXO15266 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SHOXO15266 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
SHOXO15266 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.91■□□□□ 0.78
SHOXO15266 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHOXO15266 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHOXO15266 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHOXO15266 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHOXO15266 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SHOXO15266 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SHOXO15266 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHOXO15266 ABHD17AP4-201ENST00000411545 909 ntBASIC19.9■□□□□ 0.78
SHOXO15266 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHOXO15266 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SHOXO15266 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHOXO15266 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHOXO15266 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SHOXO15266 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.9■□□□□ 0.78
SHOXO15266 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHOXO15266 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHOXO15266 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHOXO15266 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHOXO15266 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHOXO15266 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHOXO15266 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHOXO15266 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
SHOXO15266 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.88■□□□□ 0.77
SHOXO15266 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHOXO15266 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SHOXO15266 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SHOXO15266 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHOXO15266 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.88■□□□□ 0.77
SHOXO15266 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHOXO15266 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SHOXO15266 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SHOXO15266 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHOXO15266 AC097639.1-201ENST00000565519 1891 ntBASIC19.88■□□□□ 0.77
SHOXO15266 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHOXO15266 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.87■□□□□ 0.77
SHOXO15266 MIR219A2-201ENST00000608502 1504 ntBASIC19.87■□□□□ 0.77
SHOXO15266 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHOXO15266 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHOXO15266 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHOXO15266 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.87■□□□□ 0.77
SHOXO15266 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHOXO15266 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHOXO15266 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHOXO15266 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.87■□□□□ 0.77
SHOXO15266 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHOXO15266 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHOXO15266 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHOXO15266 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHOXO15266 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHOXO15266 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHOXO15266 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SHOXO15266 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHOXO15266 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.86■□□□□ 0.77
SHOXO15266 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHOXO15266 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.86■□□□□ 0.77
SHOXO15266 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.86■□□□□ 0.77
SHOXO15266 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.86■□□□□ 0.77
SHOXO15266 AC148477.6-201ENST00000623746 465 ntBASIC19.86■□□□□ 0.77
SHOXO15266 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.86■□□□□ 0.77
SHOXO15266 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.86■□□□□ 0.77
SHOXO15266 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SHOXO15266 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHOXO15266 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.85■□□□□ 0.77
SHOXO15266 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHOXO15266 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHOXO15266 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms