Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 DUX4L5-201ENST00000630834 1275 ntBASIC22.93■■□□□ 1.26
CACNA1AO00555 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
CACNA1AO00555 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
CACNA1AO00555 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
CACNA1AO00555 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.93■■□□□ 1.26
CACNA1AO00555 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.93■■□□□ 1.26
CACNA1AO00555 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.93■■□□□ 1.26
CACNA1AO00555 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.93■■□□□ 1.26
CACNA1AO00555 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
CACNA1AO00555 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CACNA1AO00555 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
CACNA1AO00555 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.93■■□□□ 1.26
CACNA1AO00555 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.92■■□□□ 1.26
CACNA1AO00555 MIR4767-201ENST00000582827 78 ntBASIC22.92■■□□□ 1.26
CACNA1AO00555 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.92■■□□□ 1.26
CACNA1AO00555 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
CACNA1AO00555 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
CACNA1AO00555 AC004911.1-201ENST00000416316 871 ntBASIC22.91■■□□□ 1.26
CACNA1AO00555 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.91■■□□□ 1.26
CACNA1AO00555 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
CACNA1AO00555 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CACNA1AO00555 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
CACNA1AO00555 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.91■■□□□ 1.26
CACNA1AO00555 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CACNA1AO00555 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CACNA1AO00555 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
CACNA1AO00555 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CACNA1AO00555 TMEM191A-211ENST00000637163 1067 ntBASIC22.9■■□□□ 1.26
CACNA1AO00555 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
CACNA1AO00555 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.89■■□□□ 1.26
CACNA1AO00555 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.89■■□□□ 1.26
CACNA1AO00555 RAP2CP1-201ENST00000605103 478 ntBASIC22.89■■□□□ 1.26
CACNA1AO00555 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CACNA1AO00555 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.89■■□□□ 1.25
CACNA1AO00555 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.89■■□□□ 1.25
CACNA1AO00555 AC093827.2-201ENST00000512654 315 ntBASIC22.88■■□□□ 1.25
CACNA1AO00555 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
CACNA1AO00555 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CACNA1AO00555 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.88■■□□□ 1.25
CACNA1AO00555 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
CACNA1AO00555 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CACNA1AO00555 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.88■■□□□ 1.25
CACNA1AO00555 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CACNA1AO00555 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.87■■□□□ 1.25
CACNA1AO00555 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.87■■□□□ 1.25
CACNA1AO00555 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CACNA1AO00555 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CACNA1AO00555 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.87■■□□□ 1.25
CACNA1AO00555 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CACNA1AO00555 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.86■■□□□ 1.25
CACNA1AO00555 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.86■■□□□ 1.25
CACNA1AO00555 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CACNA1AO00555 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CACNA1AO00555 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.86■■□□□ 1.25
CACNA1AO00555 YBX1P1-201ENST00000445822 960 ntBASIC22.86■■□□□ 1.25
CACNA1AO00555 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CACNA1AO00555 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.85■■□□□ 1.25
CACNA1AO00555 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.85■■□□□ 1.25
CACNA1AO00555 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
CACNA1AO00555 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
CACNA1AO00555 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
CACNA1AO00555 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.85■■□□□ 1.25
CACNA1AO00555 AC241377.3-202ENST00000626088 1088 ntBASIC22.85■■□□□ 1.25
CACNA1AO00555 AC241585.3-202ENST00000628937 1088 ntBASIC22.85■■□□□ 1.25
CACNA1AO00555 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.84■■□□□ 1.25
CACNA1AO00555 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CACNA1AO00555 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.84■■□□□ 1.25
CACNA1AO00555 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CACNA1AO00555 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.83■■□□□ 1.25
CACNA1AO00555 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.83■■□□□ 1.25
CACNA1AO00555 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CACNA1AO00555 DUX4L19-201ENST00000557448 1267 ntBASIC22.83■■□□□ 1.25
CACNA1AO00555 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
CACNA1AO00555 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
CACNA1AO00555 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CACNA1AO00555 AF131216.4-201ENST00000638924 1588 ntBASIC22.83■■□□□ 1.24
CACNA1AO00555 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CACNA1AO00555 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.82■■□□□ 1.24
CACNA1AO00555 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.82■■□□□ 1.24
CACNA1AO00555 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CACNA1AO00555 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
CACNA1AO00555 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
CACNA1AO00555 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.82■■□□□ 1.24
CACNA1AO00555 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.82■■□□□ 1.24
CACNA1AO00555 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.81■■□□□ 1.24
CACNA1AO00555 SYT6-210ENST00000641643 1587 ntBASIC22.81■■□□□ 1.24
CACNA1AO00555 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.81■■□□□ 1.24
CACNA1AO00555 AC004448.1-201ENST00000458332 883 ntBASIC22.81■■□□□ 1.24
CACNA1AO00555 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CACNA1AO00555 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CACNA1AO00555 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CACNA1AO00555 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CACNA1AO00555 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CACNA1AO00555 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CACNA1AO00555 AC008764.7-201ENST00000593779 1081 ntBASIC22.8■■□□□ 1.24
CACNA1AO00555 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.79■■□□□ 1.24
CACNA1AO00555 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
CACNA1AO00555 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.79■■□□□ 1.24
CACNA1AO00555 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
CACNA1AO00555 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms