Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV25-1A0A075B6N4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV25-1A0A075B6N4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV25-1A0A075B6N4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV25-1A0A075B6N4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV25-1A0A075B6N4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV25-1A0A075B6N4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBV25-1A0A075B6N4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV25-1A0A075B6N4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TRBV25-1A0A075B6N4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV25-1A0A075B6N4 HLA-V-202ENST00000446817 847 ntBASIC16.86■□□□□ 0.29
TRBV25-1A0A075B6N4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV25-1A0A075B6N4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV25-1A0A075B6N4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV25-1A0A075B6N4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRBV25-1A0A075B6N4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV25-1A0A075B6N4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV25-1A0A075B6N4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV25-1A0A075B6N4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV25-1A0A075B6N4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV25-1A0A075B6N4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.85■□□□□ 0.29
TRBV25-1A0A075B6N4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
TRBV25-1A0A075B6N4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV25-1A0A075B6N4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.84■□□□□ 0.29
TRBV25-1A0A075B6N4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRBV25-1A0A075B6N4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TRBV25-1A0A075B6N4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV25-1A0A075B6N4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
TRBV25-1A0A075B6N4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRBV25-1A0A075B6N4 AC097639.1-201ENST00000565519 1891 ntBASIC16.84■□□□□ 0.29
TRBV25-1A0A075B6N4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV25-1A0A075B6N4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV25-1A0A075B6N4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV25-1A0A075B6N4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRBV25-1A0A075B6N4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV25-1A0A075B6N4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV25-1A0A075B6N4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV25-1A0A075B6N4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV25-1A0A075B6N4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV25-1A0A075B6N4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV25-1A0A075B6N4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV25-1A0A075B6N4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV25-1A0A075B6N4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV25-1A0A075B6N4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV25-1A0A075B6N4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC16.83■□□□□ 0.28
TRBV25-1A0A075B6N4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV25-1A0A075B6N4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV25-1A0A075B6N4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV25-1A0A075B6N4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV25-1A0A075B6N4 AL359504.2-201ENST00000605506 1601 ntBASIC16.82■□□□□ 0.28
TRBV25-1A0A075B6N4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRBV25-1A0A075B6N4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRBV25-1A0A075B6N4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV25-1A0A075B6N4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV25-1A0A075B6N4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.82■□□□□ 0.28
TRBV25-1A0A075B6N4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV25-1A0A075B6N4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.82■□□□□ 0.28
TRBV25-1A0A075B6N4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV25-1A0A075B6N4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV25-1A0A075B6N4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC16.81■□□□□ 0.28
TRBV25-1A0A075B6N4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBV25-1A0A075B6N4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRBV25-1A0A075B6N4 CR559946.2-201ENST00000623684 991 ntBASIC16.81■□□□□ 0.28
TRBV25-1A0A075B6N4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV25-1A0A075B6N4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV25-1A0A075B6N4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV25-1A0A075B6N4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV25-1A0A075B6N4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV25-1A0A075B6N4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV25-1A0A075B6N4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.8■□□□□ 0.28
TRBV25-1A0A075B6N4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.8■□□□□ 0.28
TRBV25-1A0A075B6N4 DUSP8P5-201ENST00000422884 1815 ntBASIC16.8■□□□□ 0.28
TRBV25-1A0A075B6N4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV25-1A0A075B6N4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.8■□□□□ 0.28
TRBV25-1A0A075B6N4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.8■□□□□ 0.28
TRBV25-1A0A075B6N4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRBV25-1A0A075B6N4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV25-1A0A075B6N4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV25-1A0A075B6N4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV25-1A0A075B6N4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV25-1A0A075B6N4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TRBV25-1A0A075B6N4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRBV25-1A0A075B6N4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV25-1A0A075B6N4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV25-1A0A075B6N4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV25-1A0A075B6N4 ABHD17AP4-201ENST00000411545 909 ntBASIC16.79■□□□□ 0.28
TRBV25-1A0A075B6N4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV25-1A0A075B6N4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV25-1A0A075B6N4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV25-1A0A075B6N4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV25-1A0A075B6N4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV25-1A0A075B6N4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV25-1A0A075B6N4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV25-1A0A075B6N4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV25-1A0A075B6N4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV25-1A0A075B6N4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV25-1A0A075B6N4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC16.78■□□□□ 0.28
TRBV25-1A0A075B6N4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.78■□□□□ 0.28
TRBV25-1A0A075B6N4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV25-1A0A075B6N4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms