Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 AP001059.3-201ENST00000619053 235 ntBASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
RAI2Q9Y5P3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 GAPDHP21-201ENST00000450301 1010 ntBASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAI2Q9Y5P3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
RAI2Q9Y5P3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 AC002472.2-201ENST00000442739 958 ntBASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 RN7SL204P-201ENST00000582831 262 ntBASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 AL359881.2-201ENST00000602973 570 ntBASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 AC018529.1-201ENST00000613063 361 ntBASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.39■□□□□ 0.21
RAI2Q9Y5P3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms