Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 AC004233.3-201ENST00000607794 1269 ntBASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 AC008738.7-201ENST00000609744 511 ntBASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 AC079328.2-201ENST00000561241 3354 ntBASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 AC099398.1-201ENST00000567919 2776 ntBASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC00588Q9Y4M8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
LINC00588Q9Y4M8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC11.08□□□□□ -0.63
LINC00588Q9Y4M8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 AC010336.2-201ENST00000564226 506 ntBASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 AL033527.5-202ENST00000641632 1098 ntBASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 AL136982.4-201ENST00000437689 1740 ntBASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00588Q9Y4M8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 CYP4F24P-201ENST00000586049 1580 ntBASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 PCDHA12-202ENST00000613593 2588 ntBASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 NKILA-202ENST00000614771 2598 ntBASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00588Q9Y4M8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms