Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF6Q9Y4K3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAF6Q9Y4K3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF6Q9Y4K3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
TRAF6Q9Y4K3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAF6Q9Y4K3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.83■□□□□ 0.13
TRAF6Q9Y4K3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.83■□□□□ 0.13
TRAF6Q9Y4K3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.13
TRAF6Q9Y4K3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
TRAF6Q9Y4K3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAF6Q9Y4K3 SSR4P1-203ENST00000599569 2260 ntBASIC15.83■□□□□ 0.13
TRAF6Q9Y4K3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAF6Q9Y4K3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 HAUS4P1-201ENST00000406739 1145 ntBASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 AC093724.1-201ENST00000448659 1027 ntBASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 AF186996.4-201ENST00000467186 377 ntBASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAF6Q9Y4K3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 AP002469.2-201ENST00000531724 424 ntBASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 AC117500.6-201ENST00000624871 588 ntBASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 AC020658.6-201ENST00000623564 1870 ntBASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 AC063926.3-201ENST00000624734 5658 ntBASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF6Q9Y4K3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms