Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 MCCD1P2-201ENST00000423228 335 ntBASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 AC098859.1-201ENST00000502915 1238 ntBASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 MIR4321-201ENST00000592276 80 ntBASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 AC063926.3-201ENST00000624734 5658 ntBASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 CDC14C-201ENST00000428251 1719 ntBASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 LINC02447-202ENST00000501888 2146 ntBASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 AL355306.1-201ENST00000415580 579 ntBASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 AL671277.1-201ENST00000429656 993 ntBASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 AC024267.1-201ENST00000582320 895 ntBASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 AC092723.2-201ENST00000624955 793 ntBASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 AC069224.1-201ENST00000566372 1715 ntBASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VPS9D1Q9Y2B5 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 AL022342.1-201ENST00000400363 863 ntBASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 AC004832.2-201ENST00000426397 482 ntBASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 FAM58CP-201ENST00000435741 640 ntBASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS9D1Q9Y2B5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms