Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 AC092506.1-202ENST00000401022 528 ntBASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 AP005482.1-201ENST00000563722 1273 ntBASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 WASH4P-201ENST00000564273 1246 ntBASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 AC018529.1-201ENST00000613063 361 ntBASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HPS5Q9UPZ3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 WASH6P-202ENST00000359512 1437 ntBASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 AL596087.1-201ENST00000400979 1969 ntBASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 AC087499.6-201ENST00000411576 835 ntBASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 GNAQP1-201ENST00000444815 1067 ntBASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 AC008494.3-201ENST00000606615 944 ntBASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 AC003101.2-201ENST00000612557 442 ntBASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 AC133552.6-201ENST00000613406 534 ntBASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HPS5Q9UPZ3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 ELK2AP-201ENST00000392510 1007 ntBASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 ACTBP11-201ENST00000436287 1126 ntBASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 AC093724.1-201ENST00000448659 1027 ntBASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 AC004840.1-201ENST00000636359 365 ntBASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS5Q9UPZ3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 AC006449.6-201ENST00000612330 2296 ntBASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 AL391825.1-201ENST00000457671 1364 ntBASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 TTTY23B-201ENST00000442790 549 ntBASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.23■□□□□ 0.67
HPS5Q9UPZ3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms