Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 AC005695.3-201ENST00000614522 232 ntBASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.44■□□□□ 0.7
ZC3H4Q9UPT8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 AC005077.2-201ENST00000449786 690 ntBASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 AP006547.1-201ENST00000563435 692 ntBASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 SPCS2P2-201ENST00000603270 608 ntBASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZC3H4Q9UPT8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 MBP-227ENST00000526111 581 ntTSL 4 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 AC128714.1-201ENST00000637035 887 ntBASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 AC138627.1-207ENST00000641560 1006 ntBASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 HCG11-201ENST00000411553 5696 ntBASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.42■□□□□ 0.7
ZC3H4Q9UPT8 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms