Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 AC007950.2-201ENST00000615045 2347 ntBASIC13.44□□□□□ -0.26
CALYQ9NYX4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 HAUS4P1-201ENST00000406739 1145 ntBASIC13.44□□□□□ -0.26
CALYQ9NYX4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 AC245100.5-201ENST00000452108 331 ntBASIC13.44□□□□□ -0.26
CALYQ9NYX4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 AC073389.1-201ENST00000595595 795 ntBASIC13.44□□□□□ -0.26
CALYQ9NYX4 MTDHP5-201ENST00000598980 586 ntBASIC13.44□□□□□ -0.26
CALYQ9NYX4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 C20orf181-201ENST00000623918 480 ntBASIC13.44□□□□□ -0.26
CALYQ9NYX4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 AC068587.6-202ENST00000641839 5619 ntBASIC13.44□□□□□ -0.26
CALYQ9NYX4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 AC063926.3-201ENST00000624734 5658 ntBASIC13.44□□□□□ -0.26
CALYQ9NYX4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CALYQ9NYX4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.44□□□□□ -0.26
CALYQ9NYX4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CALYQ9NYX4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CALYQ9NYX4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CALYQ9NYX4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CALYQ9NYX4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CALYQ9NYX4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CALYQ9NYX4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CALYQ9NYX4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CALYQ9NYX4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CALYQ9NYX4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CALYQ9NYX4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CALYQ9NYX4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CALYQ9NYX4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CALYQ9NYX4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 ADH5P3-201ENST00000433842 1137 ntBASIC13.43□□□□□ -0.26
CALYQ9NYX4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 ACTG1P14-201ENST00000446382 1122 ntBASIC13.43□□□□□ -0.26
CALYQ9NYX4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 SPDYE11-202ENST00000450699 704 ntBASIC13.43□□□□□ -0.26
CALYQ9NYX4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CALYQ9NYX4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CALYQ9NYX4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CALYQ9NYX4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 SPDYE9P-201ENST00000570642 692 ntBASIC13.43□□□□□ -0.26
CALYQ9NYX4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 AC027307.2-201ENST00000591252 911 ntBASIC13.43□□□□□ -0.26
CALYQ9NYX4 MIR4321-201ENST00000592276 80 ntBASIC13.43□□□□□ -0.26
CALYQ9NYX4 SPDYE10P-202ENST00000612005 668 ntBASIC13.43□□□□□ -0.26
CALYQ9NYX4 SPDYE8P-202ENST00000612377 668 ntBASIC13.43□□□□□ -0.26
CALYQ9NYX4 AC008267.7-201ENST00000624570 1194 ntBASIC13.43□□□□□ -0.26
CALYQ9NYX4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CALYQ9NYX4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CALYQ9NYX4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms