Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.7■□□□□ 0.1
LIN28AQ9H9Z2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIN28AQ9H9Z2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIN28AQ9H9Z2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIN28AQ9H9Z2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.7■□□□□ 0.1
LIN28AQ9H9Z2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIN28AQ9H9Z2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIN28AQ9H9Z2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
LIN28AQ9H9Z2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 AC129492.6-201ENST00000611383 1305 ntBASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 AC023141.13-201ENST00000604991 943 ntBASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 AC055717.3-201ENST00000622967 595 ntBASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN28AQ9H9Z2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 AC004832.2-201ENST00000426397 482 ntBASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 DUX4L17-201ENST00000557360 1267 ntBASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 AC007064.4-201ENST00000637740 555 ntBASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 AC010491.1-201ENST00000563101 2797 ntBASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 FAM45BP-202ENST00000592932 1624 ntBASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIN28AQ9H9Z2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms