Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 AC120114.3-201ENST00000611923 658 ntBASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 AC091812.2-201ENST00000619081 385 ntBASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 AP001282.1-201ENST00000531301 1499 ntBASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 AC091951.1-201ENST00000512854 2465 ntBASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 AL355306.1-201ENST00000415580 579 ntBASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 AC098859.1-201ENST00000502915 1238 ntBASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 PGAM5P1-201ENST00000518923 814 ntBASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 AL135744.1-201ENST00000565098 629 ntBASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 AC027601.4-201ENST00000611259 610 ntBASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 SPTSSB-204ENST00000617024 1292 ntBASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 FAM197Y3-203ENST00000618346 717 ntBASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.84□□□□□ -0.03
RSPO3Q9BXY4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.83□□□□□ -0.03
RSPO3Q9BXY4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RSPO3Q9BXY4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RSPO3Q9BXY4 AC023157.3-201ENST00000619086 2088 ntBASIC14.83□□□□□ -0.03
RSPO3Q9BXY4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.83□□□□□ -0.03
RSPO3Q9BXY4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 MIR346-201ENST00000362234 95 ntBASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 TFAMP1-201ENST00000412727 736 ntBASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 MED15P5-201ENST00000423150 992 ntBASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 KRT8P48-201ENST00000515599 1220 ntBASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 AC027307.2-201ENST00000591252 911 ntBASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RSPO3Q9BXY4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms