Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 AF228730.5-201ENST00000530288 346 ntBASIC11.37□□□□□ -0.59
UPK3BQ9BT76 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 AL512356.2-201ENST00000546955 174 ntBASIC11.37□□□□□ -0.59
UPK3BQ9BT76 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 LINC00628-201ENST00000628516 1289 ntBASIC11.37□□□□□ -0.59
UPK3BQ9BT76 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 FRMD6-AS1-201ENST00000617151 2229 ntBASIC11.37□□□□□ -0.59
UPK3BQ9BT76 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC11.37□□□□□ -0.59
UPK3BQ9BT76 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK3BQ9BT76 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 AC067930.6-201ENST00000623257 4947 ntBASIC11.36□□□□□ -0.59
UPK3BQ9BT76 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 RPL30-202ENST00000396070 440 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 HLA-J-202ENST00000469281 1241 ntBASIC11.36□□□□□ -0.59
UPK3BQ9BT76 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 AC067863.1-201ENST00000494933 530 ntBASIC11.36□□□□□ -0.59
UPK3BQ9BT76 RFPL4AP1-201ENST00000530883 850 ntBASIC11.36□□□□□ -0.59
UPK3BQ9BT76 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 AC093520.2-201ENST00000561830 333 ntBASIC11.36□□□□□ -0.59
UPK3BQ9BT76 AC004449.1-201ENST00000564240 433 ntBASIC11.36□□□□□ -0.59
UPK3BQ9BT76 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 AC073389.1-201ENST00000595595 795 ntBASIC11.36□□□□□ -0.59
UPK3BQ9BT76 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 AP001059.3-201ENST00000619053 235 ntBASIC11.36□□□□□ -0.59
UPK3BQ9BT76 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 AC092068.3-201ENST00000587894 2016 ntBASIC11.36□□□□□ -0.59
UPK3BQ9BT76 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC11.36□□□□□ -0.59
UPK3BQ9BT76 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms