Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN18Q99952 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN18Q99952 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN18Q99952 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN18Q99952 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN18Q99952 AC141586.5-201ENST00000624546 2050 ntBASIC18.31■□□□□ 0.52
PTPN18Q99952 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN18Q99952 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN18Q99952 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN18Q99952 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN18Q99952 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN18Q99952 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN18Q99952 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN18Q99952 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN18Q99952 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.31■□□□□ 0.52
PTPN18Q99952 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN18Q99952 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN18Q99952 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN18Q99952 Z93015.1-201ENST00000451718 390 ntBASIC18.31■□□□□ 0.52
PTPN18Q99952 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN18Q99952 SLED1-202ENST00000512051 380 ntBASIC18.31■□□□□ 0.52
PTPN18Q99952 AC105129.2-201ENST00000559536 390 ntBASIC18.31■□□□□ 0.52
PTPN18Q99952 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.31■□□□□ 0.52
PTPN18Q99952 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.31■□□□□ 0.52
PTPN18Q99952 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN18Q99952 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.31■□□□□ 0.52
PTPN18Q99952 AC005695.3-201ENST00000614522 232 ntBASIC18.31■□□□□ 0.52
PTPN18Q99952 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.31■□□□□ 0.52
PTPN18Q99952 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.31■□□□□ 0.52
PTPN18Q99952 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PTPN18Q99952 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN18Q99952 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
PTPN18Q99952 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PTPN18Q99952 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
PTPN18Q99952 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN18Q99952 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN18Q99952 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.31■□□□□ 0.52
PTPN18Q99952 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN18Q99952 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN18Q99952 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN18Q99952 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN18Q99952 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN18Q99952 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN18Q99952 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN18Q99952 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN18Q99952 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PTPN18Q99952 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN18Q99952 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN18Q99952 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN18Q99952 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PTPN18Q99952 RPS3-201ENST00000278572 907 ntTSL 3 BASIC18.3■□□□□ 0.52
PTPN18Q99952 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN18Q99952 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN18Q99952 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PTPN18Q99952 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.3■□□□□ 0.52
PTPN18Q99952 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN18Q99952 FAM197Y7-201ENST00000432892 766 ntBASIC18.3■□□□□ 0.52
PTPN18Q99952 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PTPN18Q99952 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN18Q99952 AC078819.1-201ENST00000547454 765 ntBASIC18.3■□□□□ 0.52
PTPN18Q99952 AC012085.1-201ENST00000548270 765 ntBASIC18.3■□□□□ 0.52
PTPN18Q99952 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN18Q99952 MIR4741-201ENST00000579822 90 ntBASIC18.3■□□□□ 0.52
PTPN18Q99952 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.3■□□□□ 0.52
PTPN18Q99952 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.3■□□□□ 0.52
PTPN18Q99952 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
PTPN18Q99952 AC244452.3-201ENST00000636814 210 ntBASIC18.3■□□□□ 0.52
PTPN18Q99952 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN18Q99952 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN18Q99952 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN18Q99952 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN18Q99952 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN18Q99952 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPN18Q99952 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN18Q99952 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PTPN18Q99952 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN18Q99952 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN18Q99952 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN18Q99952 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN18Q99952 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN18Q99952 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN18Q99952 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN18Q99952 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN18Q99952 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN18Q99952 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
PTPN18Q99952 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN18Q99952 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PTPN18Q99952 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.29■□□□□ 0.52
PTPN18Q99952 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN18Q99952 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.29■□□□□ 0.52
PTPN18Q99952 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
PTPN18Q99952 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN18Q99952 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN18Q99952 BTBD6P1-201ENST00000412176 1267 ntBASIC18.29■□□□□ 0.52
PTPN18Q99952 FNTAP2-201ENST00000430308 634 ntBASIC18.29■□□□□ 0.52
PTPN18Q99952 AC005077.2-201ENST00000449786 690 ntBASIC18.29■□□□□ 0.52
PTPN18Q99952 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.29■□□□□ 0.52
PTPN18Q99952 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN18Q99952 AC026410.3-201ENST00000514280 936 ntBASIC18.29■□□□□ 0.52
PTPN18Q99952 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms