Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 AC068418.2-201ENST00000577309 3703 ntBASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 SPTSSB-204ENST00000617024 1292 ntBASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MS4A4EQ96PG1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 ALG1L5P-201ENST00000482043 771 ntBASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 AC024267.1-201ENST00000582320 895 ntBASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms