Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.23■□□□□ 0.19
SIPA1Q96FS4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIPA1Q96FS4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIPA1Q96FS4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIPA1Q96FS4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.23■□□□□ 0.19
SIPA1Q96FS4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.23■□□□□ 0.19
SIPA1Q96FS4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
SIPA1Q96FS4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIPA1Q96FS4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIPA1Q96FS4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIPA1Q96FS4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIPA1Q96FS4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 NFIC-211ENST00000641145 8399 ntBASIC16.22■□□□□ 0.19
SIPA1Q96FS4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.22■□□□□ 0.19
SIPA1Q96FS4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 INE1-201ENST00000456273 945 ntBASIC16.22■□□□□ 0.19
SIPA1Q96FS4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SIPA1Q96FS4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 FO393414.2-201ENST00000405153 598 ntBASIC16.21■□□□□ 0.19
SIPA1Q96FS4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 GIMAP3P-201ENST00000495150 836 ntBASIC16.21■□□□□ 0.19
SIPA1Q96FS4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 AL136982.4-201ENST00000437689 1740 ntBASIC16.21■□□□□ 0.19
SIPA1Q96FS4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms