Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 MIR4453-201ENST00000584019 89 ntBASIC17.13■□□□□ 0.33
ATP2A3Q93084 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
ATP2A3Q93084 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2A3Q93084 CICP6-201ENST00000457191 2729 ntBASIC17.12■□□□□ 0.33
ATP2A3Q93084 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A3Q93084 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A3Q93084 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A3Q93084 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A3Q93084 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A3Q93084 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 AC142381.1-201ENST00000426099 345 ntBASIC17.12■□□□□ 0.33
ATP2A3Q93084 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 TSPY16P-201ENST00000449843 468 ntBASIC17.12■□□□□ 0.33
ATP2A3Q93084 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 TERF1P3-201ENST00000505638 1227 ntBASIC17.12■□□□□ 0.33
ATP2A3Q93084 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 AC190387.1-201ENST00000551683 408 ntBASIC17.12■□□□□ 0.33
ATP2A3Q93084 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A3Q93084 AC073389.1-201ENST00000595595 795 ntBASIC17.12■□□□□ 0.33
ATP2A3Q93084 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.12■□□□□ 0.33
ATP2A3Q93084 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A3Q93084 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A3Q93084 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A3Q93084 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A3Q93084 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A3Q93084 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A3Q93084 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A3Q93084 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A3Q93084 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP2A3Q93084 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2A3Q93084 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A3Q93084 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A3Q93084 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ATP2A3Q93084 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ATP2A3Q93084 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A3Q93084 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ATP2A3Q93084 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A3Q93084 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP2A3Q93084 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A3Q93084 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A3Q93084 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A3Q93084 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A3Q93084 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ATP2A3Q93084 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ATP2A3Q93084 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A3Q93084 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP2A3Q93084 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A3Q93084 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A3Q93084 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A3Q93084 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP2A3Q93084 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP2A3Q93084 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ATP2A3Q93084 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ATP2A3Q93084 AC097493.3-201ENST00000509725 367 ntBASIC17.11■□□□□ 0.33
ATP2A3Q93084 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.11■□□□□ 0.33
ATP2A3Q93084 RARRES2P9-201ENST00000565168 469 ntBASIC17.11■□□□□ 0.33
ATP2A3Q93084 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A3Q93084 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A3Q93084 CYP2T1P-202ENST00000641596 2535 ntBASIC17.11■□□□□ 0.33
ATP2A3Q93084 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2A3Q93084 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP2A3Q93084 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP2A3Q93084 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms