Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 KRT8P23-201ENST00000560090 1207 ntBASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 LINC01225-203ENST00000563550 1244 ntBASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 AC004449.1-201ENST00000564240 433 ntBASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 AC009093.7-201ENST00000623853 1223 ntBASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SMARCC2Q8TAQ2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 AL139400.1-201ENST00000366220 510 ntBASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCC2Q8TAQ2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 AC245100.5-201ENST00000452108 331 ntBASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 AL138918.1-201ENST00000568306 659 ntBASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 AC073389.1-201ENST00000595595 795 ntBASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 LINC00628-201ENST00000628516 1289 ntBASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCC2Q8TAQ2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCC2Q8TAQ2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.95■□□□□ 0.62
SMARCC2Q8TAQ2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCC2Q8TAQ2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCC2Q8TAQ2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCC2Q8TAQ2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCC2Q8TAQ2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.95■□□□□ 0.62
SMARCC2Q8TAQ2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCC2Q8TAQ2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCC2Q8TAQ2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.95■□□□□ 0.62
SMARCC2Q8TAQ2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms