Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 TUBBP5-203ENST00000508529 1334 ntBASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 AC006480.2-201ENST00000609770 1337 ntBASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 AC114501.1-201ENST00000445949 172 ntBASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 RN7SL181P-201ENST00000462921 277 ntBASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL22A1Q8NFW1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 B9D1-203ENST00000395615 805 ntTSL 3 BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 MSRA-203ENST00000441698 788 ntTSL 2 BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL22A1Q8NFW1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 HNRNPA1P63-201ENST00000427917 963 ntBASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 RN7SL774P-201ENST00000577467 290 ntBASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
COL22A1Q8NFW1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL22A1Q8NFW1 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL22A1Q8NFW1 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL22A1Q8NFW1 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL22A1Q8NFW1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
COL22A1Q8NFW1 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
COL22A1Q8NFW1 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
COL22A1Q8NFW1 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL22A1Q8NFW1 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL22A1Q8NFW1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.08■□□□□ 0.97
COL22A1Q8NFW1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC21.08■□□□□ 0.97
COL22A1Q8NFW1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL22A1Q8NFW1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL22A1Q8NFW1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.08■□□□□ 0.97
COL22A1Q8NFW1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL22A1Q8NFW1 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC21.08■□□□□ 0.96
COL22A1Q8NFW1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
COL22A1Q8NFW1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
COL22A1Q8NFW1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL22A1Q8NFW1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
COL22A1Q8NFW1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.96
COL22A1Q8NFW1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
COL22A1Q8NFW1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
COL22A1Q8NFW1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
COL22A1Q8NFW1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
COL22A1Q8NFW1 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL22A1Q8NFW1 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL22A1Q8NFW1 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL22A1Q8NFW1 CRCP-204ENST00000398684 492 ntTSL 2 BASIC21.07■□□□□ 0.96
COL22A1Q8NFW1 KLF2P2-201ENST00000416807 1039 ntBASIC21.07■□□□□ 0.96
COL22A1Q8NFW1 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
COL22A1Q8NFW1 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms