Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 HAUS4P1-201ENST00000406739 1145 ntBASIC15.2■□□□□ 0.02
NUP43Q8NFH3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 AC105233.2-201ENST00000523697 349 ntBASIC15.2■□□□□ 0.02
NUP43Q8NFH3 AF228730.5-201ENST00000530288 346 ntBASIC15.2■□□□□ 0.02
NUP43Q8NFH3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 AC027307.2-201ENST00000591252 911 ntBASIC15.2■□□□□ 0.02
NUP43Q8NFH3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 CICP6-201ENST00000457191 2729 ntBASIC15.2■□□□□ 0.02
NUP43Q8NFH3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUP43Q8NFH3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 YBX2P1-201ENST00000394192 760 ntBASIC15.19■□□□□ 0.02
NUP43Q8NFH3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 AC004832.2-201ENST00000426397 482 ntBASIC15.19■□□□□ 0.02
NUP43Q8NFH3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 SPDYE11-202ENST00000450699 704 ntBASIC15.19■□□□□ 0.02
NUP43Q8NFH3 AC245100.5-201ENST00000452108 331 ntBASIC15.19■□□□□ 0.02
NUP43Q8NFH3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 SPDYE9P-201ENST00000570642 692 ntBASIC15.19■□□□□ 0.02
NUP43Q8NFH3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 MIR4321-201ENST00000592276 80 ntBASIC15.19■□□□□ 0.02
NUP43Q8NFH3 MTDHP5-201ENST00000598980 586 ntBASIC15.19■□□□□ 0.02
NUP43Q8NFH3 SPDYE10P-202ENST00000612005 668 ntBASIC15.19■□□□□ 0.02
NUP43Q8NFH3 SPDYE8P-202ENST00000612377 668 ntBASIC15.19■□□□□ 0.02
NUP43Q8NFH3 AC008267.7-201ENST00000624570 1194 ntBASIC15.19■□□□□ 0.02
NUP43Q8NFH3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NUP43Q8NFH3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUP43Q8NFH3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms