Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 RARRES2P8-201ENST00000566335 367 ntBASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 AL691403.2-201ENST00000618460 490 ntBASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SIMC1Q8NDZ2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
SIMC1Q8NDZ2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.33■□□□□ 0.05
SIMC1Q8NDZ2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.33■□□□□ 0.05
SIMC1Q8NDZ2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SIMC1Q8NDZ2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.33■□□□□ 0.05
SIMC1Q8NDZ2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
SIMC1Q8NDZ2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SIMC1Q8NDZ2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SIMC1Q8NDZ2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SIMC1Q8NDZ2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 RPSAP43-201ENST00000402237 625 ntBASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 GPX1P2-201ENST00000429271 606 ntBASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 KRT18P34-201ENST00000488218 1270 ntBASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 AC243562.1-201ENST00000560672 389 ntBASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 AL135744.1-201ENST00000565098 629 ntBASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 AL161645.1-201ENST00000622716 1255 ntBASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 AC006449.6-201ENST00000612330 2296 ntBASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.33■□□□□ 0.04
SIMC1Q8NDZ2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms