Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 SLC25A47P1-201ENST00000531577 414 ntBASIC17.48■□□□□ 0.39
HERC6Q8IVU3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 AC068587.10-201ENST00000641210 219 ntBASIC17.48■□□□□ 0.39
HERC6Q8IVU3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 AC141586.5-201ENST00000624546 2050 ntBASIC17.48■□□□□ 0.39
HERC6Q8IVU3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 AC092053.1-201ENST00000605787 1936 ntBASIC17.47■□□□□ 0.39
HERC6Q8IVU3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERC6Q8IVU3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 OR6D1P-203ENST00000641209 4860 ntBASIC17.46■□□□□ 0.39
HERC6Q8IVU3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 HAUS4P1-201ENST00000406739 1145 ntBASIC17.46■□□□□ 0.39
HERC6Q8IVU3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HERC6Q8IVU3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
HERC6Q8IVU3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HERC6Q8IVU3 TUBB1P2-201ENST00000422712 1306 ntBASIC17.46■□□□□ 0.38
HERC6Q8IVU3 TUBB1P1-201ENST00000503144 1300 ntBASIC17.46■□□□□ 0.38
HERC6Q8IVU3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.46■□□□□ 0.38
HERC6Q8IVU3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.46■□□□□ 0.38
HERC6Q8IVU3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.46■□□□□ 0.38
HERC6Q8IVU3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
HERC6Q8IVU3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms