Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 AC092119.3-201ENST00000612618 583 ntBASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NUDCD3Q8IVD9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 AC006504.4-201ENST00000592118 1568 ntBASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 TMBIM7P-203ENST00000641617 1718 ntBASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 AC006486.2-201ENST00000624246 2199 ntBASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NUDCD3Q8IVD9 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 AC008677.1-201ENST00000519230 1561 ntBASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 AC069148.1-201ENST00000608741 768 ntBASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NUDCD3Q8IVD9 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms