Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CCDC71Q8IV32 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
CCDC71Q8IV32 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC71Q8IV32 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC71Q8IV32 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC71Q8IV32 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 AC093028.1-201ENST00000622998 982 ntBASIC15.26■□□□□ 0.03
CCDC71Q8IV32 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC71Q8IV32 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 REXO1L8P-201ENST00000604378 1897 ntBASIC15.25■□□□□ 0.03
CCDC71Q8IV32 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 AL031731.1-201ENST00000642131 2094 ntBASIC15.25■□□□□ 0.03
CCDC71Q8IV32 TSPY26P-202ENST00000565928 3884 ntBASIC15.25■□□□□ 0.03
CCDC71Q8IV32 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 ACTG1P14-201ENST00000446382 1122 ntBASIC15.25■□□□□ 0.03
CCDC71Q8IV32 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 AC092902.6-201ENST00000641783 218 ntBASIC15.25■□□□□ 0.03
CCDC71Q8IV32 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 CDC14C-201ENST00000428251 1719 ntBASIC15.25■□□□□ 0.03
CCDC71Q8IV32 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC71Q8IV32 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC71Q8IV32 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms