Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 RBM17P3-201ENST00000417687 1192 ntBASIC16.84■□□□□ 0.29
CCDC25Q86WR0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 FOSL1P1-201ENST00000511041 816 ntBASIC16.84■□□□□ 0.29
CCDC25Q86WR0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 AC107918.2-201ENST00000530817 355 ntBASIC16.84■□□□□ 0.29
CCDC25Q86WR0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 MTDHP4-201ENST00000600287 670 ntBASIC16.84■□□□□ 0.29
CCDC25Q86WR0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 AC004706.3-202ENST00000621574 984 ntBASIC16.84■□□□□ 0.29
CCDC25Q86WR0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC25Q86WR0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 ELK2BP-201ENST00000415014 1224 ntBASIC16.83■□□□□ 0.28
CCDC25Q86WR0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 AC006504.4-201ENST00000592118 1568 ntBASIC16.83■□□□□ 0.28
CCDC25Q86WR0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 OR2I1P-210ENST00000642037 4691 ntBASIC16.83■□□□□ 0.28
CCDC25Q86WR0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC25Q86WR0 AC097376.2-205ENST00000610159 5334 ntBASIC16.83■□□□□ 0.28
CCDC25Q86WR0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 SART3-203ENST00000546611 1184 ntBASIC16.82■□□□□ 0.28
CCDC25Q86WR0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.82■□□□□ 0.28
CCDC25Q86WR0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.82■□□□□ 0.28
CCDC25Q86WR0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC25Q86WR0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms