Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 GGTLC5P-201ENST00000617623 998 ntBASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 AC007326.2-201ENST00000624224 7579 ntBASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 CICP13-201ENST00000422015 2789 ntBASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 AC138035.3-201ENST00000622706 2791 ntBASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 HAUS4P1-201ENST00000406739 1145 ntBASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 FOSL1P1-201ENST00000511041 816 ntBASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 AC025062.2-201ENST00000605477 670 ntBASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.13□□□□□ -0.15
LRRTM1Q86UE6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 AC012569.1-201ENST00000591191 1524 ntBASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 AC087388.1-201ENST00000571370 1112 ntBASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms