Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
CSMD3Q7Z407 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
CSMD3Q7Z407 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CSMD3Q7Z407 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CSMD3Q7Z407 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
CSMD3Q7Z407 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 RHOXF1P1-202ENST00000635473 501 ntBASIC11.08□□□□□ -0.64
CSMD3Q7Z407 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 AC099398.1-201ENST00000567919 2776 ntBASIC11.08□□□□□ -0.64
CSMD3Q7Z407 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 RERG-209ENST00000546331 1383 ntTSL 2 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.08□□□□□ -0.64
CSMD3Q7Z407 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 AC141586.5-201ENST00000624546 2050 ntBASIC11.07□□□□□ -0.64
CSMD3Q7Z407 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 TUBB8P12-201ENST00000308911 1335 ntBASIC11.07□□□□□ -0.64
CSMD3Q7Z407 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 TUBB7P-202ENST00000428444 1305 ntBASIC11.07□□□□□ -0.64
CSMD3Q7Z407 TUBB8P7-204ENST00000567960 1332 ntBASIC11.07□□□□□ -0.64
CSMD3Q7Z407 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 AC016700.1-201ENST00000429424 312 ntBASIC11.07□□□□□ -0.64
CSMD3Q7Z407 AC104306.2-201ENST00000451877 341 ntBASIC11.07□□□□□ -0.64
CSMD3Q7Z407 VDAC1P7-201ENST00000462417 847 ntBASIC11.07□□□□□ -0.64
CSMD3Q7Z407 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC11.07□□□□□ -0.64
CSMD3Q7Z407 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CSMD3Q7Z407 DRD5P1-201ENST00000456605 1438 ntBASIC11.06□□□□□ -0.64
CSMD3Q7Z407 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CSMD3Q7Z407 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms