Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.27□□□□□ -0.29
VPS13CQ709C8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.27□□□□□ -0.29
VPS13CQ709C8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
VPS13CQ709C8 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VPS13CQ709C8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.27□□□□□ -0.29
VPS13CQ709C8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.29
VPS13CQ709C8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VPS13CQ709C8 RN7SL769P-201ENST00000469386 295 ntBASIC13.27□□□□□ -0.29
VPS13CQ709C8 FAM86LP-201ENST00000478302 853 ntBASIC13.27□□□□□ -0.29
VPS13CQ709C8 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.27□□□□□ -0.29
VPS13CQ709C8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
VPS13CQ709C8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VPS13CQ709C8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
VPS13CQ709C8 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VPS13CQ709C8 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.27□□□□□ -0.29
VPS13CQ709C8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VPS13CQ709C8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VPS13CQ709C8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
VPS13CQ709C8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
VPS13CQ709C8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 AC026740.1-201ENST00000607068 791 ntBASIC13.26□□□□□ -0.29
VPS13CQ709C8 PCGF3-213ENST00000620529 1899 ntBASIC13.26□□□□□ -0.29
VPS13CQ709C8 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 AC016396.2-201ENST00000562575 1417 ntBASIC13.26□□□□□ -0.29
VPS13CQ709C8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 MIR33B-201ENST00000385104 96 ntBASIC13.26□□□□□ -0.29
VPS13CQ709C8 AL355864.2-201ENST00000447420 863 ntBASIC13.26□□□□□ -0.29
VPS13CQ709C8 BX284668.4-201ENST00000453917 508 ntBASIC13.26□□□□□ -0.29
VPS13CQ709C8 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 AC020914.3-201ENST00000594712 304 ntBASIC13.26□□□□□ -0.29
VPS13CQ709C8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS13CQ709C8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
VPS13CQ709C8 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 AC106886.4-201ENST00000623557 2502 ntBASIC13.25□□□□□ -0.29
VPS13CQ709C8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 AC079316.1-201ENST00000548397 411 ntBASIC13.25□□□□□ -0.29
VPS13CQ709C8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13CQ709C8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.25□□□□□ -0.29
VPS13CQ709C8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms