Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AC139530.3-201ENST00000620344 690 ntBASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 ELL2P1-201ENST00000413990 1906 ntBASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 PMS2P4-201ENST00000412466 1052 ntBASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 MIR3909-201ENST00000579518 119 ntBASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 AC006538.1-201ENST00000567905 1585 ntBASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KHDC1Q4VXA5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 AL031731.1-201ENST00000642131 2094 ntBASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 AL355306.1-201ENST00000415580 579 ntBASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 CEND1P1-201ENST00000451006 455 ntBASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 AC006538.3-201ENST00000612495 578 ntBASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 AC010491.1-201ENST00000563101 2797 ntBASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.46■□□□□ 0.23
KHDC1Q4VXA5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms