Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2BQ00403 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2BQ00403 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2BQ00403 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.63■□□□□ 0.41
GTF2BQ00403 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2BQ00403 RPL37AP1-201ENST00000412502 279 ntBASIC17.63■□□□□ 0.41
GTF2BQ00403 AL080243.2-201ENST00000418783 582 ntBASIC17.63■□□□□ 0.41
GTF2BQ00403 AC092580.3-201ENST00000430932 139 ntBASIC17.63■□□□□ 0.41
GTF2BQ00403 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2BQ00403 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2BQ00403 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
GTF2BQ00403 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
GTF2BQ00403 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2BQ00403 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.63■□□□□ 0.41
GTF2BQ00403 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.63■□□□□ 0.41
GTF2BQ00403 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.63■□□□□ 0.41
GTF2BQ00403 AL158211.3-201ENST00000607385 239 ntBASIC17.63■□□□□ 0.41
GTF2BQ00403 AL138828.2-201ENST00000615812 383 ntBASIC17.63■□□□□ 0.41
GTF2BQ00403 SPDYE12P-201ENST00000618416 771 ntBASIC17.63■□□□□ 0.41
GTF2BQ00403 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2BQ00403 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2BQ00403 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
GTF2BQ00403 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
GTF2BQ00403 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
GTF2BQ00403 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
GTF2BQ00403 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2BQ00403 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.63■□□□□ 0.41
GTF2BQ00403 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2BQ00403 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
GTF2BQ00403 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.62■□□□□ 0.41
GTF2BQ00403 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2BQ00403 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2BQ00403 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2BQ00403 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.62■□□□□ 0.41
GTF2BQ00403 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2BQ00403 TNRC18P3-201ENST00000441896 2691 ntBASIC17.62■□□□□ 0.41
GTF2BQ00403 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2BQ00403 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.62■□□□□ 0.41
GTF2BQ00403 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.62■□□□□ 0.41
GTF2BQ00403 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2BQ00403 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.62■□□□□ 0.41
GTF2BQ00403 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2BQ00403 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2BQ00403 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2BQ00403 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2BQ00403 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
GTF2BQ00403 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
GTF2BQ00403 AC097493.3-201ENST00000509725 367 ntBASIC17.62■□□□□ 0.41
GTF2BQ00403 AC073592.8-201ENST00000624126 511 ntBASIC17.62■□□□□ 0.41
GTF2BQ00403 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2BQ00403 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.62■□□□□ 0.41
GTF2BQ00403 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2BQ00403 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2BQ00403 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.62■□□□□ 0.41
GTF2BQ00403 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
GTF2BQ00403 FO538757.1-201ENST00000623083 1397 ntBASIC17.62■□□□□ 0.41
GTF2BQ00403 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2BQ00403 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
GTF2BQ00403 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2BQ00403 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
GTF2BQ00403 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.62■□□□□ 0.41
GTF2BQ00403 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.62■□□□□ 0.41
GTF2BQ00403 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2BQ00403 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
GTF2BQ00403 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.62■□□□□ 0.41
GTF2BQ00403 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.61■□□□□ 0.41
GTF2BQ00403 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.61■□□□□ 0.41
GTF2BQ00403 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
GTF2BQ00403 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
GTF2BQ00403 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.61■□□□□ 0.41
GTF2BQ00403 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.61■□□□□ 0.41
GTF2BQ00403 FO393414.2-201ENST00000405153 598 ntBASIC17.61■□□□□ 0.41
GTF2BQ00403 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 HIST3H2BA-201ENST00000436555 524 ntBASIC17.61■□□□□ 0.41
GTF2BQ00403 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.61■□□□□ 0.41
GTF2BQ00403 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.61■□□□□ 0.41
GTF2BQ00403 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 AC106028.4-201ENST00000614509 607 ntBASIC17.61■□□□□ 0.41
GTF2BQ00403 AC093512.1-201ENST00000617969 520 ntBASIC17.61■□□□□ 0.41
GTF2BQ00403 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
GTF2BQ00403 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
GTF2BQ00403 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.61■□□□□ 0.41
GTF2BQ00403 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2BQ00403 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms