Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP46P62068 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.08■□□□□ 0.32
USP46P62068 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.08■□□□□ 0.32
USP46P62068 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
USP46P62068 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
USP46P62068 AC236430.1-201ENST00000402231 743 ntBASIC17.08■□□□□ 0.32
USP46P62068 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.08■□□□□ 0.32
USP46P62068 TSPY16P-201ENST00000449843 468 ntBASIC17.08■□□□□ 0.32
USP46P62068 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP46P62068 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.08■□□□□ 0.32
USP46P62068 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.08■□□□□ 0.32
USP46P62068 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.08■□□□□ 0.32
USP46P62068 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.08■□□□□ 0.32
USP46P62068 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.08■□□□□ 0.32
USP46P62068 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.08■□□□□ 0.32
USP46P62068 AC024267.1-201ENST00000582320 895 ntBASIC17.08■□□□□ 0.32
USP46P62068 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.08■□□□□ 0.32
USP46P62068 AL589739.1-201ENST00000607720 493 ntBASIC17.08■□□□□ 0.32
USP46P62068 TEX28P1-201ENST00000613479 1221 ntBASIC17.08■□□□□ 0.32
USP46P62068 TEX28P2-201ENST00000617764 1221 ntBASIC17.08■□□□□ 0.32
USP46P62068 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP46P62068 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.08■□□□□ 0.32
USP46P62068 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP46P62068 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.08■□□□□ 0.32
USP46P62068 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.08■□□□□ 0.32
USP46P62068 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP46P62068 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.07■□□□□ 0.32
USP46P62068 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP46P62068 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP46P62068 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP46P62068 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP46P62068 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.07■□□□□ 0.32
USP46P62068 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP46P62068 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.07■□□□□ 0.32
USP46P62068 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP46P62068 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
USP46P62068 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP46P62068 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP46P62068 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.07■□□□□ 0.32
USP46P62068 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP46P62068 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP46P62068 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
USP46P62068 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
USP46P62068 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
USP46P62068 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP46P62068 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP46P62068 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP46P62068 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.07■□□□□ 0.32
USP46P62068 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP46P62068 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.07■□□□□ 0.32
USP46P62068 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
USP46P62068 AL512638.1-201ENST00000457493 794 ntBASIC17.07■□□□□ 0.32
USP46P62068 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.07■□□□□ 0.32
USP46P62068 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.07■□□□□ 0.32
USP46P62068 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.07■□□□□ 0.32
USP46P62068 RN7SL204P-201ENST00000582831 262 ntBASIC17.07■□□□□ 0.32
USP46P62068 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.07■□□□□ 0.32
USP46P62068 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.07■□□□□ 0.32
USP46P62068 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP46P62068 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP46P62068 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.07■□□□□ 0.32
USP46P62068 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.07■□□□□ 0.32
USP46P62068 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP46P62068 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP46P62068 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.07■□□□□ 0.32
USP46P62068 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
USP46P62068 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.06■□□□□ 0.32
USP46P62068 CETN4P-206ENST00000642099 2168 ntBASIC17.06■□□□□ 0.32
USP46P62068 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP46P62068 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP46P62068 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP46P62068 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
USP46P62068 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.06■□□□□ 0.32
USP46P62068 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.06■□□□□ 0.32
USP46P62068 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
USP46P62068 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP46P62068 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
USP46P62068 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
USP46P62068 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP46P62068 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
USP46P62068 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP46P62068 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP46P62068 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP46P62068 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.06■□□□□ 0.32
USP46P62068 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP46P62068 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.06■□□□□ 0.32
USP46P62068 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP46P62068 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP46P62068 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
USP46P62068 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP46P62068 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.06■□□□□ 0.32
USP46P62068 AL080243.2-201ENST00000418783 582 ntBASIC17.06■□□□□ 0.32
USP46P62068 AC002472.2-201ENST00000442739 958 ntBASIC17.06■□□□□ 0.32
USP46P62068 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.06■□□□□ 0.32
USP46P62068 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.06■□□□□ 0.32
USP46P62068 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.06■□□□□ 0.32
USP46P62068 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
USP46P62068 AL079307.3-201ENST00000556114 283 ntBASIC17.06■□□□□ 0.32
USP46P62068 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
USP46P62068 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms