Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.23■□□□□ 0.35
MCCD1P59942 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.23■□□□□ 0.35
MCCD1P59942 AC008894.3-201ENST00000624324 3103 ntBASIC17.23■□□□□ 0.35
MCCD1P59942 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MCCD1P59942 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MCCD1P59942 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
MCCD1P59942 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.23■□□□□ 0.35
MCCD1P59942 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.23■□□□□ 0.35
MCCD1P59942 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.23■□□□□ 0.35
MCCD1P59942 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MCCD1P59942 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MCCD1P59942 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MCCD1P59942 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MCCD1P59942 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MCCD1P59942 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.22■□□□□ 0.35
MCCD1P59942 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.22■□□□□ 0.35
MCCD1P59942 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.22■□□□□ 0.35
MCCD1P59942 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
MCCD1P59942 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
MCCD1P59942 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.22■□□□□ 0.35
MCCD1P59942 CNN2P2-201ENST00000443536 909 ntBASIC17.22■□□□□ 0.35
MCCD1P59942 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
MCCD1P59942 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.22■□□□□ 0.35
MCCD1P59942 CNN2P3-201ENST00000450201 906 ntBASIC17.22■□□□□ 0.35
MCCD1P59942 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.22■□□□□ 0.35
MCCD1P59942 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.22■□□□□ 0.35
MCCD1P59942 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.22■□□□□ 0.35
MCCD1P59942 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
MCCD1P59942 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.22■□□□□ 0.35
MCCD1P59942 AC140878.1-201ENST00000565277 250 ntBASIC17.22■□□□□ 0.35
MCCD1P59942 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.22■□□□□ 0.35
MCCD1P59942 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.22■□□□□ 0.35
MCCD1P59942 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 AL136317.3-201ENST00000618497 906 ntBASIC17.22■□□□□ 0.35
MCCD1P59942 FO538757.1-201ENST00000623083 1397 ntBASIC17.22■□□□□ 0.35
MCCD1P59942 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.22■□□□□ 0.35
MCCD1P59942 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
MCCD1P59942 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
MCCD1P59942 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MCCD1P59942 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MCCD1P59942 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.21■□□□□ 0.35
MCCD1P59942 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MCCD1P59942 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.21■□□□□ 0.35
MCCD1P59942 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MCCD1P59942 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MCCD1P59942 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.21■□□□□ 0.35
MCCD1P59942 CETN4P-206ENST00000642099 2168 ntBASIC17.21■□□□□ 0.35
MCCD1P59942 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MCCD1P59942 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
MCCD1P59942 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MCCD1P59942 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MCCD1P59942 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
MCCD1P59942 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.21■□□□□ 0.35
MCCD1P59942 AC092580.3-201ENST00000430932 139 ntBASIC17.21■□□□□ 0.35
MCCD1P59942 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.21■□□□□ 0.35
MCCD1P59942 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.21■□□□□ 0.35
MCCD1P59942 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MCCD1P59942 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.21■□□□□ 0.35
MCCD1P59942 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MCCD1P59942 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MCCD1P59942 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.21■□□□□ 0.35
MCCD1P59942 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.21■□□□□ 0.35
MCCD1P59942 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.21■□□□□ 0.35
MCCD1P59942 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.21■□□□□ 0.35
MCCD1P59942 TEX28P1-201ENST00000613479 1221 ntBASIC17.21■□□□□ 0.35
MCCD1P59942 AL138828.2-201ENST00000615812 383 ntBASIC17.21■□□□□ 0.35
MCCD1P59942 TEX28P2-201ENST00000617764 1221 ntBASIC17.21■□□□□ 0.35
MCCD1P59942 AL033527.5-202ENST00000641632 1098 ntBASIC17.21■□□□□ 0.35
MCCD1P59942 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MCCD1P59942 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MCCD1P59942 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
MCCD1P59942 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MCCD1P59942 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MCCD1P59942 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MCCD1P59942 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.21■□□□□ 0.35
MCCD1P59942 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MCCD1P59942 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MCCD1P59942 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.21■□□□□ 0.35
MCCD1P59942 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MCCD1P59942 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MCCD1P59942 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.2■□□□□ 0.34
MCCD1P59942 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MCCD1P59942 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms