Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC015911.4-201ENST00000588022 1070 ntBASIC14.66□□□□□ -0.06
SUMO3P55854 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 AC003101.2-201ENST00000612557 442 ntBASIC14.66□□□□□ -0.06
SUMO3P55854 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.66□□□□□ -0.06
SUMO3P55854 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.66□□□□□ -0.06
SUMO3P55854 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.66□□□□□ -0.06
SUMO3P55854 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SUMO3P55854 PCDH8P1-201ENST00000428983 2773 ntBASIC14.66□□□□□ -0.06
SUMO3P55854 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SUMO3P55854 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.66□□□□□ -0.06
SUMO3P55854 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 AC024909.3-201ENST00000611513 2257 ntBASIC14.66□□□□□ -0.06
SUMO3P55854 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SUMO3P55854 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SUMO3P55854 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SUMO3P55854 AC079328.2-201ENST00000561241 3354 ntBASIC14.65□□□□□ -0.06
SUMO3P55854 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SUMO3P55854 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SUMO3P55854 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
SUMO3P55854 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
SUMO3P55854 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SUMO3P55854 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.65□□□□□ -0.06
SUMO3P55854 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SUMO3P55854 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.65□□□□□ -0.06
SUMO3P55854 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SUMO3P55854 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
SUMO3P55854 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SUMO3P55854 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.65□□□□□ -0.06
SUMO3P55854 EEF1DP4-201ENST00000446006 880 ntBASIC14.65□□□□□ -0.06
SUMO3P55854 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.65□□□□□ -0.06
SUMO3P55854 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.65□□□□□ -0.06
SUMO3P55854 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SUMO3P55854 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SUMO3P55854 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.65□□□□□ -0.06
SUMO3P55854 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.65□□□□□ -0.06
SUMO3P55854 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.65□□□□□ -0.06
SUMO3P55854 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.65□□□□□ -0.06
SUMO3P55854 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SUMO3P55854 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.65□□□□□ -0.06
SUMO3P55854 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SUMO3P55854 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.65□□□□□ -0.06
SUMO3P55854 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SUMO3P55854 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.65□□□□□ -0.06
SUMO3P55854 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SUMO3P55854 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SUMO3P55854 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.65□□□□□ -0.06
SUMO3P55854 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SUMO3P55854 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SUMO3P55854 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SUMO3P55854 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SUMO3P55854 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.65□□□□□ -0.06
SUMO3P55854 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
SUMO3P55854 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.65□□□□□ -0.06
SUMO3P55854 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SUMO3P55854 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SUMO3P55854 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SUMO3P55854 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SUMO3P55854 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SUMO3P55854 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.65□□□□□ -0.06
SUMO3P55854 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.64□□□□□ -0.07
SUMO3P55854 CYP4F24P-201ENST00000586049 1580 ntBASIC14.64□□□□□ -0.07
SUMO3P55854 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.64□□□□□ -0.07
SUMO3P55854 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
SUMO3P55854 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.64□□□□□ -0.07
SUMO3P55854 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.64□□□□□ -0.07
SUMO3P55854 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.64□□□□□ -0.07
SUMO3P55854 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.64□□□□□ -0.07
SUMO3P55854 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.64□□□□□ -0.07
SUMO3P55854 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.64□□□□□ -0.07
SUMO3P55854 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.64□□□□□ -0.07
SUMO3P55854 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.64□□□□□ -0.07
SUMO3P55854 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SUMO3P55854 AC067863.1-201ENST00000494933 530 ntBASIC14.64□□□□□ -0.07
SUMO3P55854 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.64□□□□□ -0.07
SUMO3P55854 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.64□□□□□ -0.07
SUMO3P55854 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.64□□□□□ -0.07
SUMO3P55854 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
SUMO3P55854 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.64□□□□□ -0.07
SUMO3P55854 GPALPP1-207ENST00000611650 899 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms